Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT2A6NDA9 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT2A6NDA9 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LRIT2A6NDA9 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
LRIT2A6NDA9 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT2A6NDA9 AC006277.1-201ENST00000624348 1610 ntBASIC16.1■□□□□ 0.17
LRIT2A6NDA9 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT2A6NDA9 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.1■□□□□ 0.17
LRIT2A6NDA9 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.1■□□□□ 0.17
LRIT2A6NDA9 VN2R19P-201ENST00000442399 1052 ntBASIC16.1■□□□□ 0.17
LRIT2A6NDA9 RPL13AP23-201ENST00000480739 586 ntBASIC16.1■□□□□ 0.17
LRIT2A6NDA9 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.1■□□□□ 0.17
LRIT2A6NDA9 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.1■□□□□ 0.17
LRIT2A6NDA9 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.1■□□□□ 0.17
LRIT2A6NDA9 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT2A6NDA9 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.1■□□□□ 0.17
LRIT2A6NDA9 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.1■□□□□ 0.17
LRIT2A6NDA9 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.1■□□□□ 0.17
LRIT2A6NDA9 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.1■□□□□ 0.17
LRIT2A6NDA9 AC013467.2-201ENST00000605472 835 ntBASIC16.1■□□□□ 0.17
LRIT2A6NDA9 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.1■□□□□ 0.17
LRIT2A6NDA9 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.1■□□□□ 0.17
LRIT2A6NDA9 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.1■□□□□ 0.17
LRIT2A6NDA9 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LRIT2A6NDA9 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT2A6NDA9 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT2A6NDA9 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT2A6NDA9 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.1■□□□□ 0.17
LRIT2A6NDA9 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT2A6NDA9 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT2A6NDA9 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
LRIT2A6NDA9 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT2A6NDA9 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT2A6NDA9 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.1■□□□□ 0.17
LRIT2A6NDA9 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.09■□□□□ 0.17
LRIT2A6NDA9 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.09■□□□□ 0.17
LRIT2A6NDA9 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
LRIT2A6NDA9 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.09■□□□□ 0.17
LRIT2A6NDA9 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRIT2A6NDA9 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRIT2A6NDA9 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.09■□□□□ 0.17
LRIT2A6NDA9 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRIT2A6NDA9 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
LRIT2A6NDA9 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.09■□□□□ 0.17
LRIT2A6NDA9 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.09■□□□□ 0.17
LRIT2A6NDA9 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRIT2A6NDA9 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRIT2A6NDA9 FAM185BP-201ENST00000443595 716 ntBASIC16.09■□□□□ 0.17
LRIT2A6NDA9 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.09■□□□□ 0.17
LRIT2A6NDA9 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.09■□□□□ 0.17
LRIT2A6NDA9 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.09■□□□□ 0.17
LRIT2A6NDA9 AC091167.2-201ENST00000579581 588 ntBASIC16.09■□□□□ 0.17
LRIT2A6NDA9 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.09■□□□□ 0.17
LRIT2A6NDA9 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.09■□□□□ 0.17
LRIT2A6NDA9 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.09■□□□□ 0.17
LRIT2A6NDA9 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRIT2A6NDA9 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRIT2A6NDA9 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
LRIT2A6NDA9 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.09■□□□□ 0.17
LRIT2A6NDA9 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.09■□□□□ 0.17
LRIT2A6NDA9 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRIT2A6NDA9 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRIT2A6NDA9 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRIT2A6NDA9 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.09■□□□□ 0.17
LRIT2A6NDA9 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRIT2A6NDA9 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRIT2A6NDA9 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
LRIT2A6NDA9 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRIT2A6NDA9 AC104109.2-201ENST00000602919 1418 ntBASIC16.09■□□□□ 0.17
LRIT2A6NDA9 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
LRIT2A6NDA9 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
LRIT2A6NDA9 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.09■□□□□ 0.17
LRIT2A6NDA9 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRIT2A6NDA9 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LRIT2A6NDA9 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
LRIT2A6NDA9 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
LRIT2A6NDA9 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRIT2A6NDA9 SLC22A20-204ENST00000530038 1673 ntBASIC16.08■□□□□ 0.17
LRIT2A6NDA9 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LRIT2A6NDA9 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.17
LRIT2A6NDA9 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRIT2A6NDA9 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRIT2A6NDA9 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.08■□□□□ 0.17
LRIT2A6NDA9 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRIT2A6NDA9 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.08■□□□□ 0.16
LRIT2A6NDA9 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRIT2A6NDA9 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRIT2A6NDA9 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
LRIT2A6NDA9 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRIT2A6NDA9 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
LRIT2A6NDA9 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRIT2A6NDA9 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRIT2A6NDA9 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRIT2A6NDA9 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRIT2A6NDA9 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
LRIT2A6NDA9 CRYGEP-201ENST00000412192 528 ntBASIC16.08■□□□□ 0.16
LRIT2A6NDA9 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.08■□□□□ 0.16
LRIT2A6NDA9 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRIT2A6NDA9 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRIT2A6NDA9 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms