Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-7A0A0A0MS04 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TRBV6-7A0A0A0MS04 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.22□□□□□ -0.13
TRBV6-7A0A0A0MS04 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-7A0A0A0MS04 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-7A0A0A0MS04 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
TRBV6-7A0A0A0MS04 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-7A0A0A0MS04 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.22□□□□□ -0.13
TRBV6-7A0A0A0MS04 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.22□□□□□ -0.13
TRBV6-7A0A0A0MS04 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-7A0A0A0MS04 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-7A0A0A0MS04 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.22□□□□□ -0.13
TRBV6-7A0A0A0MS04 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.22□□□□□ -0.13
TRBV6-7A0A0A0MS04 CHCHD2P8-201ENST00000429873 447 ntBASIC14.22□□□□□ -0.13
TRBV6-7A0A0A0MS04 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TRBV6-7A0A0A0MS04 AC091607.1-201ENST00000490318 1060 ntBASIC14.22□□□□□ -0.13
TRBV6-7A0A0A0MS04 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.22□□□□□ -0.13
TRBV6-7A0A0A0MS04 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.22□□□□□ -0.13
TRBV6-7A0A0A0MS04 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.22□□□□□ -0.13
TRBV6-7A0A0A0MS04 AL121672.3-201ENST00000608644 468 ntBASIC14.22□□□□□ -0.13
TRBV6-7A0A0A0MS04 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TRBV6-7A0A0A0MS04 AC073592.5-201ENST00000624854 528 ntBASIC14.22□□□□□ -0.13
TRBV6-7A0A0A0MS04 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.22□□□□□ -0.13
TRBV6-7A0A0A0MS04 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-7A0A0A0MS04 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-7A0A0A0MS04 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
TRBV6-7A0A0A0MS04 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.22□□□□□ -0.13
TRBV6-7A0A0A0MS04 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-7A0A0A0MS04 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-7A0A0A0MS04 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-7A0A0A0MS04 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-7A0A0A0MS04 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-7A0A0A0MS04 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-7A0A0A0MS04 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-7A0A0A0MS04 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-7A0A0A0MS04 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TRBV6-7A0A0A0MS04 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
TRBV6-7A0A0A0MS04 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TRBV6-7A0A0A0MS04 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TRBV6-7A0A0A0MS04 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.21□□□□□ -0.13
TRBV6-7A0A0A0MS04 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV6-7A0A0A0MS04 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TRBV6-7A0A0A0MS04 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TRBV6-7A0A0A0MS04 TUBB8P12-201ENST00000308911 1335 ntBASIC14.21□□□□□ -0.13
TRBV6-7A0A0A0MS04 TUBB7P-202ENST00000428444 1305 ntBASIC14.21□□□□□ -0.13
TRBV6-7A0A0A0MS04 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.21□□□□□ -0.13
TRBV6-7A0A0A0MS04 TUBB8P7-204ENST00000567960 1332 ntBASIC14.21□□□□□ -0.13
TRBV6-7A0A0A0MS04 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV6-7A0A0A0MS04 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.21□□□□□ -0.13
TRBV6-7A0A0A0MS04 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV6-7A0A0A0MS04 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.21□□□□□ -0.13
TRBV6-7A0A0A0MS04 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.21□□□□□ -0.13
TRBV6-7A0A0A0MS04 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV6-7A0A0A0MS04 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.21□□□□□ -0.13
TRBV6-7A0A0A0MS04 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.21□□□□□ -0.13
TRBV6-7A0A0A0MS04 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.21□□□□□ -0.13
TRBV6-7A0A0A0MS04 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.21□□□□□ -0.13
TRBV6-7A0A0A0MS04 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV6-7A0A0A0MS04 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC14.21□□□□□ -0.13
TRBV6-7A0A0A0MS04 BX276092.5-203ENST00000456199 560 ntBASIC14.21□□□□□ -0.13
TRBV6-7A0A0A0MS04 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV6-7A0A0A0MS04 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.21□□□□□ -0.13
TRBV6-7A0A0A0MS04 AP005901.3-202ENST00000581653 237 ntBASIC14.21□□□□□ -0.13
TRBV6-7A0A0A0MS04 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
TRBV6-7A0A0A0MS04 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.21□□□□□ -0.13
TRBV6-7A0A0A0MS04 NTF6B-201ENST00000591913 560 ntBASIC14.21□□□□□ -0.13
TRBV6-7A0A0A0MS04 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV6-7A0A0A0MS04 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV6-7A0A0A0MS04 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
TRBV6-7A0A0A0MS04 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV6-7A0A0A0MS04 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TRBV6-7A0A0A0MS04 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV6-7A0A0A0MS04 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.21□□□□□ -0.13
TRBV6-7A0A0A0MS04 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.21□□□□□ -0.13
TRBV6-7A0A0A0MS04 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.21□□□□□ -0.13
TRBV6-7A0A0A0MS04 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
TRBV6-7A0A0A0MS04 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TRBV6-7A0A0A0MS04 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.21□□□□□ -0.14
TRBV6-7A0A0A0MS04 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.21□□□□□ -0.14
TRBV6-7A0A0A0MS04 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRBV6-7A0A0A0MS04 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRBV6-7A0A0A0MS04 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
TRBV6-7A0A0A0MS04 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 TP73-AS1-210ENST00000637775 1455 ntBASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms