Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 FAM8A6P-201ENST00000407496 1135 ntBASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 ZNF444P1-201ENST00000559497 298 ntBASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 AC111152.3-201ENST00000569699 673 ntBASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 AC140113.3-201ENST00000605663 199 ntBASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 AL023973.1-201ENST00000624619 620 ntBASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV18A0A075B6X5 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 AL513477.1-201ENST00000602865 2407 ntBASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 AC007967.3-201ENST00000434308 558 ntBASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 GPR32P1-201ENST00000601788 811 ntBASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV18A0A075B6X5 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TRAV18A0A075B6X5 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV18A0A075B6X5 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV18A0A075B6X5 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV18A0A075B6X5 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV18A0A075B6X5 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV18A0A075B6X5 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV18A0A075B6X5 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV18A0A075B6X5 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAV18A0A075B6X5 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV18A0A075B6X5 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV18A0A075B6X5 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV18A0A075B6X5 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TRAV18A0A075B6X5 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV18A0A075B6X5 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TRAV18A0A075B6X5 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV18A0A075B6X5 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC14.62□□□□□ -0.07
TRAV18A0A075B6X5 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV18A0A075B6X5 AC008550.1-201ENST00000511500 884 ntBASIC14.62□□□□□ -0.07
TRAV18A0A075B6X5 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAV18A0A075B6X5 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TRAV18A0A075B6X5 CLN6-221ENST00000637494 765 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAV18A0A075B6X5 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAV18A0A075B6X5 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV18A0A075B6X5 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 795.2 ms