Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC093323.1-202ENST00000635031 2045 ntBASIC23.26■■□□□ 1.31
PCDHGA11Q9Y5H2 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGA11Q9Y5H2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGA11Q9Y5H2 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
PCDHGA11Q9Y5H2 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGA11Q9Y5H2 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGA11Q9Y5H2 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGA11Q9Y5H2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGA11Q9Y5H2 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGA11Q9Y5H2 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGA11Q9Y5H2 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.24■■□□□ 1.31
PCDHGA11Q9Y5H2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.24■■□□□ 1.31
PCDHGA11Q9Y5H2 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGA11Q9Y5H2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.24■■□□□ 1.31
PCDHGA11Q9Y5H2 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.24■■□□□ 1.31
PCDHGA11Q9Y5H2 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGA11Q9Y5H2 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.23■■□□□ 1.31
PCDHGA11Q9Y5H2 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGA11Q9Y5H2 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
PCDHGA11Q9Y5H2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGA11Q9Y5H2 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGA11Q9Y5H2 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.23■■□□□ 1.31
PCDHGA11Q9Y5H2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
PCDHGA11Q9Y5H2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
PCDHGA11Q9Y5H2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHGA11Q9Y5H2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.22■■□□□ 1.31
PCDHGA11Q9Y5H2 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHGA11Q9Y5H2 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHGA11Q9Y5H2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
PCDHGA11Q9Y5H2 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGA11Q9Y5H2 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGA11Q9Y5H2 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
PCDHGA11Q9Y5H2 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDHGA11Q9Y5H2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
PCDHGA11Q9Y5H2 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.21■■□□□ 1.31
PCDHGA11Q9Y5H2 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGA11Q9Y5H2 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDHGA11Q9Y5H2 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.2■■□□□ 1.3
PCDHGA11Q9Y5H2 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
PCDHGA11Q9Y5H2 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGA11Q9Y5H2 AC096887.2-201ENST00000623443 1957 ntBASIC23.2■■□□□ 1.3
PCDHGA11Q9Y5H2 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
PCDHGA11Q9Y5H2 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHGA11Q9Y5H2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDHGA11Q9Y5H2 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
PCDHGA11Q9Y5H2 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHGA11Q9Y5H2 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHGA11Q9Y5H2 GPX1-201ENST00000419349 1106 ntBASIC23.19■■□□□ 1.3
PCDHGA11Q9Y5H2 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.19■■□□□ 1.3
PCDHGA11Q9Y5H2 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGA11Q9Y5H2 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHGA11Q9Y5H2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
PCDHGA11Q9Y5H2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHGA11Q9Y5H2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHGA11Q9Y5H2 RP9P-202ENST00000450133 1212 ntBASIC23.16■■□□□ 1.3
PCDHGA11Q9Y5H2 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
PCDHGA11Q9Y5H2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHGA11Q9Y5H2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.16■■□□□ 1.3
PCDHGA11Q9Y5H2 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHGA11Q9Y5H2 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.16■■□□□ 1.3
PCDHGA11Q9Y5H2 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDHGA11Q9Y5H2 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
PCDHGA11Q9Y5H2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGA11Q9Y5H2 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGA11Q9Y5H2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDHGA11Q9Y5H2 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGA11Q9Y5H2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGA11Q9Y5H2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDHGA11Q9Y5H2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.3
PCDHGA11Q9Y5H2 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
PCDHGA11Q9Y5H2 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHGA11Q9Y5H2 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.14■■□□□ 1.29
PCDHGA11Q9Y5H2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHGA11Q9Y5H2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHGA11Q9Y5H2 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHGA11Q9Y5H2 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.13■■□□□ 1.29
PCDHGA11Q9Y5H2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
PCDHGA11Q9Y5H2 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.13■■□□□ 1.29
PCDHGA11Q9Y5H2 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHGA11Q9Y5H2 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHGA11Q9Y5H2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHGA11Q9Y5H2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
PCDHGA11Q9Y5H2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGA11Q9Y5H2 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
PCDHGA11Q9Y5H2 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGA11Q9Y5H2 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.12■■□□□ 1.29
PCDHGA11Q9Y5H2 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.12■■□□□ 1.29
PCDHGA11Q9Y5H2 AC007029.1-201ENST00000604183 313 ntBASIC23.12■■□□□ 1.29
PCDHGA11Q9Y5H2 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGA11Q9Y5H2 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.11■■□□□ 1.29
PCDHGA11Q9Y5H2 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
PCDHGA11Q9Y5H2 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGA11Q9Y5H2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGA11Q9Y5H2 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGA11Q9Y5H2 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGA11Q9Y5H2 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDHGA11Q9Y5H2 AC093536.1-201ENST00000569153 554 ntBASIC23.1■■□□□ 1.29
PCDHGA11Q9Y5H2 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGA11Q9Y5H2 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
PCDHGA11Q9Y5H2 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms