Protein–RNA interactions for Protein: Q9Y5G6

PCDHGA7, Protocadherin gamma-A7, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7Q9Y5G6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHGA7Q9Y5G6 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.77■■□□□ 1.4
PCDHGA7Q9Y5G6 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
PCDHGA7Q9Y5G6 AC025884.2-201ENST00000553429 711 ntBASIC23.77■■□□□ 1.4
PCDHGA7Q9Y5G6 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.77■■□□□ 1.4
PCDHGA7Q9Y5G6 AC093323.1-202ENST00000635031 2045 ntBASIC23.77■■□□□ 1.4
PCDHGA7Q9Y5G6 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
PCDHGA7Q9Y5G6 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
PCDHGA7Q9Y5G6 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHGA7Q9Y5G6 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHGA7Q9Y5G6 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.76■■□□□ 1.39
PCDHGA7Q9Y5G6 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHGA7Q9Y5G6 AL035685.1-201ENST00000636663 812 ntBASIC23.76■■□□□ 1.39
PCDHGA7Q9Y5G6 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.76■■□□□ 1.39
PCDHGA7Q9Y5G6 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.75■■□□□ 1.39
PCDHGA7Q9Y5G6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.75■■□□□ 1.39
PCDHGA7Q9Y5G6 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
PCDHGA7Q9Y5G6 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.75■■□□□ 1.39
PCDHGA7Q9Y5G6 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHGA7Q9Y5G6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHGA7Q9Y5G6 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.75■■□□□ 1.39
PCDHGA7Q9Y5G6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
PCDHGA7Q9Y5G6 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHGA7Q9Y5G6 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHGA7Q9Y5G6 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHGA7Q9Y5G6 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHGA7Q9Y5G6 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.74■■□□□ 1.39
PCDHGA7Q9Y5G6 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
PCDHGA7Q9Y5G6 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHGA7Q9Y5G6 RP9P-202ENST00000450133 1212 ntBASIC23.73■■□□□ 1.39
PCDHGA7Q9Y5G6 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHGA7Q9Y5G6 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHGA7Q9Y5G6 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.73■■□□□ 1.39
PCDHGA7Q9Y5G6 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGA7Q9Y5G6 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGA7Q9Y5G6 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.72■■□□□ 1.39
PCDHGA7Q9Y5G6 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGA7Q9Y5G6 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGA7Q9Y5G6 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGA7Q9Y5G6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGA7Q9Y5G6 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
PCDHGA7Q9Y5G6 AC074183.2-201ENST00000623112 922 ntBASIC23.71■■□□□ 1.39
PCDHGA7Q9Y5G6 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
PCDHGA7Q9Y5G6 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGA7Q9Y5G6 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGA7Q9Y5G6 AP004609.3-201ENST00000610705 1884 ntBASIC23.7■■□□□ 1.39
PCDHGA7Q9Y5G6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHGA7Q9Y5G6 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHGA7Q9Y5G6 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.7■■□□□ 1.38
PCDHGA7Q9Y5G6 AL451085.2-201ENST00000605085 799 ntBASIC23.7■■□□□ 1.38
PCDHGA7Q9Y5G6 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHGA7Q9Y5G6 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
PCDHGA7Q9Y5G6 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
PCDHGA7Q9Y5G6 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHGA7Q9Y5G6 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
PCDHGA7Q9Y5G6 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.69■■□□□ 1.38
PCDHGA7Q9Y5G6 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHGA7Q9Y5G6 DUX4L9-201ENST00000449051 1259 ntBASIC23.69■■□□□ 1.38
PCDHGA7Q9Y5G6 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.69■■□□□ 1.38
PCDHGA7Q9Y5G6 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHGA7Q9Y5G6 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.68■■□□□ 1.38
PCDHGA7Q9Y5G6 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.68■■□□□ 1.38
PCDHGA7Q9Y5G6 RAP2CP1-202ENST00000605179 643 ntBASIC23.68■■□□□ 1.38
PCDHGA7Q9Y5G6 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGA7Q9Y5G6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.68■■□□□ 1.38
PCDHGA7Q9Y5G6 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGA7Q9Y5G6 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHGA7Q9Y5G6 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
PCDHGA7Q9Y5G6 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.67■■□□□ 1.38
PCDHGA7Q9Y5G6 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHGA7Q9Y5G6 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHGA7Q9Y5G6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHGA7Q9Y5G6 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHGA7Q9Y5G6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHGA7Q9Y5G6 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.67■■□□□ 1.38
PCDHGA7Q9Y5G6 AC093536.1-201ENST00000569153 554 ntBASIC23.67■■□□□ 1.38
PCDHGA7Q9Y5G6 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHGA7Q9Y5G6 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHGA7Q9Y5G6 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHGA7Q9Y5G6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
PCDHGA7Q9Y5G6 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGA7Q9Y5G6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGA7Q9Y5G6 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGA7Q9Y5G6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGA7Q9Y5G6 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.66■■□□□ 1.38
PCDHGA7Q9Y5G6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGA7Q9Y5G6 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGA7Q9Y5G6 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDHGA7Q9Y5G6 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
PCDHGA7Q9Y5G6 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDHGA7Q9Y5G6 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHGA7Q9Y5G6 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.65■■□□□ 1.38
PCDHGA7Q9Y5G6 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDHGA7Q9Y5G6 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHGA7Q9Y5G6 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PCDHGA7Q9Y5G6 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
PCDHGA7Q9Y5G6 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
PCDHGA7Q9Y5G6 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.64■■□□□ 1.38
PCDHGA7Q9Y5G6 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.64■■□□□ 1.38
PCDHGA7Q9Y5G6 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms