Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC27.76■■■□□ 2.03
TRIM17Q9Y577 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
TRIM17Q9Y577 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC27.76■■■□□ 2.03
TRIM17Q9Y577 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
TRIM17Q9Y577 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC27.75■■■□□ 2.03
TRIM17Q9Y577 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC27.75■■■□□ 2.03
TRIM17Q9Y577 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC27.74■■■□□ 2.03
TRIM17Q9Y577 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
TRIM17Q9Y577 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC27.74■■■□□ 2.03
TRIM17Q9Y577 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC27.74■■■□□ 2.03
TRIM17Q9Y577 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC27.74■■■□□ 2.03
TRIM17Q9Y577 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC27.74■■■□□ 2.03
TRIM17Q9Y577 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
TRIM17Q9Y577 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC27.73■■■□□ 2.03
TRIM17Q9Y577 KRT18P10-201ENST00000388836 1287 ntBASIC27.72■■■□□ 2.03
TRIM17Q9Y577 ST7-AS1-201ENST00000456775 1889 ntBASIC27.72■■■□□ 2.03
TRIM17Q9Y577 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
TRIM17Q9Y577 MTDHP2-201ENST00000601468 714 ntBASIC27.71■■■□□ 2.03
TRIM17Q9Y577 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
TRIM17Q9Y577 MIR5787-201ENST00000611784 55 ntBASIC27.7■■■□□ 2.02
TRIM17Q9Y577 ABCB10P3-201ENST00000561950 2166 ntBASIC27.7■■■□□ 2.02
TRIM17Q9Y577 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC27.7■■■□□ 2.02
TRIM17Q9Y577 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
TRIM17Q9Y577 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
TRIM17Q9Y577 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
TRIM17Q9Y577 AC142381.2-201ENST00000566120 298 ntBASIC27.69■■■□□ 2.02
TRIM17Q9Y577 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC27.69■■■□□ 2.02
TRIM17Q9Y577 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC27.69■■■□□ 2.02
TRIM17Q9Y577 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
TRIM17Q9Y577 LSM4-201ENST00000252816 986 ntTSL 2 BASIC27.68■■■□□ 2.02
TRIM17Q9Y577 AC135279.3-201ENST00000610945 1311 ntBASIC27.67■■■□□ 2.02
TRIM17Q9Y577 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC27.67■■■□□ 2.02
TRIM17Q9Y577 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
TRIM17Q9Y577 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
TRIM17Q9Y577 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC27.67■■■□□ 2.02
TRIM17Q9Y577 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
TRIM17Q9Y577 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
TRIM17Q9Y577 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC27.65■■■□□ 2.02
TRIM17Q9Y577 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
TRIM17Q9Y577 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC27.65■■■□□ 2.02
TRIM17Q9Y577 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC27.65■■■□□ 2.02
TRIM17Q9Y577 LGR4-203ENST00000480977 492 ntTSL 2 BASIC27.65■■■□□ 2.02
TRIM17Q9Y577 PBX2P1-201ENST00000493219 1291 ntBASIC27.65■■■□□ 2.02
TRIM17Q9Y577 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
TRIM17Q9Y577 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC27.65■■■□□ 2.02
TRIM17Q9Y577 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC27.64■■■□□ 2.02
TRIM17Q9Y577 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC27.64■■■□□ 2.02
TRIM17Q9Y577 AC106739.1-201ENST00000617035 715 ntBASIC27.64■■■□□ 2.02
TRIM17Q9Y577 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC27.64■■■□□ 2.01
TRIM17Q9Y577 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC27.64■■■□□ 2.01
TRIM17Q9Y577 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
TRIM17Q9Y577 AK3-203ENST00000447596 705 ntTSL 2 BASIC27.63■■■□□ 2.01
TRIM17Q9Y577 QDPR-206ENST00000508623 601 ntTSL 3 BASIC27.63■■■□□ 2.01
TRIM17Q9Y577 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC27.63■■■□□ 2.01
TRIM17Q9Y577 AL512631.2-201ENST00000604634 923 ntBASIC27.63■■■□□ 2.01
TRIM17Q9Y577 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC27.63■■■□□ 2.01
TRIM17Q9Y577 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC27.63■■■□□ 2.01
TRIM17Q9Y577 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
TRIM17Q9Y577 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC27.62■■■□□ 2.01
TRIM17Q9Y577 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
TRIM17Q9Y577 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
TRIM17Q9Y577 TK2-202ENST00000417693 1046 ntTSL 2 BASIC27.62■■■□□ 2.01
TRIM17Q9Y577 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC27.62■■■□□ 2.01
TRIM17Q9Y577 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC27.62■■■□□ 2.01
TRIM17Q9Y577 MIR4281-201ENST00000580852 62 ntBASIC27.62■■■□□ 2.01
TRIM17Q9Y577 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC27.61■■■□□ 2.01
TRIM17Q9Y577 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
TRIM17Q9Y577 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
TRIM17Q9Y577 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
TRIM17Q9Y577 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
TRIM17Q9Y577 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC27.61■■■□□ 2.01
TRIM17Q9Y577 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC27.61■■■□□ 2.01
TRIM17Q9Y577 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC27.6■■■□□ 2.01
TRIM17Q9Y577 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC27.6■■■□□ 2.01
TRIM17Q9Y577 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
TRIM17Q9Y577 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
TRIM17Q9Y577 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC27.59■■■□□ 2.01
TRIM17Q9Y577 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC27.59■■■□□ 2.01
TRIM17Q9Y577 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC27.59■■■□□ 2.01
TRIM17Q9Y577 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC27.58■■■□□ 2.01
TRIM17Q9Y577 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
TRIM17Q9Y577 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC27.58■■■□□ 2.01
TRIM17Q9Y577 EXOG-217ENST00000630638 197 ntTSL 5 BASIC27.58■■■□□ 2.01
TRIM17Q9Y577 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
TRIM17Q9Y577 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC27.57■■■□□ 2
TRIM17Q9Y577 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC27.57■■■□□ 2
TRIM17Q9Y577 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC27.57■■■□□ 2
TRIM17Q9Y577 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC27.57■■■□□ 2
TRIM17Q9Y577 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC27.57■■■□□ 2
TRIM17Q9Y577 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC27.57■■■□□ 2
TRIM17Q9Y577 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
TRIM17Q9Y577 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC27.56■■■□□ 2
TRIM17Q9Y577 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC27.56■■■□□ 2
TRIM17Q9Y577 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
TRIM17Q9Y577 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC27.55■■■□□ 2
TRIM17Q9Y577 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC27.55■■■□□ 2
TRIM17Q9Y577 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC27.55■■■□□ 2
TRIM17Q9Y577 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
TRIM17Q9Y577 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
TRIM17Q9Y577 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC27.54■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms