Protein–RNA interactions for Protein: Q9UN72

PCDHA7, Protocadherin alpha-7, humanhuman

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7Q9UN72 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC27.37■■□□□ 1.97
PCDHA7Q9UN72 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
PCDHA7Q9UN72 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PCDHA7Q9UN72 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
PCDHA7Q9UN72 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
PCDHA7Q9UN72 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC27.36■■□□□ 1.97
PCDHA7Q9UN72 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PCDHA7Q9UN72 AL157400.5-201ENST00000507624 621 ntBASIC27.36■■□□□ 1.97
PCDHA7Q9UN72 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
PCDHA7Q9UN72 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PCDHA7Q9UN72 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
PCDHA7Q9UN72 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PCDHA7Q9UN72 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PCDHA7Q9UN72 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
PCDHA7Q9UN72 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC27.34■■□□□ 1.97
PCDHA7Q9UN72 MIR7108-201ENST00000614319 87 ntBASIC27.34■■□□□ 1.97
PCDHA7Q9UN72 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PCDHA7Q9UN72 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
PCDHA7Q9UN72 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PCDHA7Q9UN72 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
PCDHA7Q9UN72 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
PCDHA7Q9UN72 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
PCDHA7Q9UN72 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PCDHA7Q9UN72 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PCDHA7Q9UN72 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC27.33■■□□□ 1.96
PCDHA7Q9UN72 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
PCDHA7Q9UN72 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC27.32■■□□□ 1.96
PCDHA7Q9UN72 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC27.32■■□□□ 1.96
PCDHA7Q9UN72 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
PCDHA7Q9UN72 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
PCDHA7Q9UN72 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC27.32■■□□□ 1.96
PCDHA7Q9UN72 MOB2-207ENST00000614710 705 ntTSL 5 BASIC27.32■■□□□ 1.96
PCDHA7Q9UN72 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
PCDHA7Q9UN72 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC27.32■■□□□ 1.96
PCDHA7Q9UN72 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
PCDHA7Q9UN72 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PCDHA7Q9UN72 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PCDHA7Q9UN72 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
PCDHA7Q9UN72 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
PCDHA7Q9UN72 AC060814.1-201ENST00000554326 538 ntBASIC27.31■■□□□ 1.96
PCDHA7Q9UN72 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PCDHA7Q9UN72 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHA7Q9UN72 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHA7Q9UN72 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHA7Q9UN72 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHA7Q9UN72 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHA7Q9UN72 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC27.3■■□□□ 1.96
PCDHA7Q9UN72 AC025884.2-201ENST00000553429 711 ntBASIC27.3■■□□□ 1.96
PCDHA7Q9UN72 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHA7Q9UN72 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHA7Q9UN72 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHA7Q9UN72 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC27.29■■□□□ 1.96
PCDHA7Q9UN72 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PCDHA7Q9UN72 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
PCDHA7Q9UN72 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
PCDHA7Q9UN72 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
PCDHA7Q9UN72 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC27.28■■□□□ 1.96
PCDHA7Q9UN72 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PCDHA7Q9UN72 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PCDHA7Q9UN72 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PCDHA7Q9UN72 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHA7Q9UN72 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC27.27■■□□□ 1.96
PCDHA7Q9UN72 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHA7Q9UN72 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHA7Q9UN72 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHA7Q9UN72 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHA7Q9UN72 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHA7Q9UN72 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.27■■□□□ 1.96
PCDHA7Q9UN72 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHA7Q9UN72 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHA7Q9UN72 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHA7Q9UN72 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHA7Q9UN72 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHA7Q9UN72 AC097639.1-201ENST00000565519 1891 ntBASIC27.27■■□□□ 1.96
PCDHA7Q9UN72 AL139125.2-201ENST00000623134 1869 ntBASIC27.27■■□□□ 1.96
PCDHA7Q9UN72 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.96
PCDHA7Q9UN72 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC27.26■■□□□ 1.95
PCDHA7Q9UN72 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PCDHA7Q9UN72 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PCDHA7Q9UN72 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHA7Q9UN72 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHA7Q9UN72 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHA7Q9UN72 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC27.25■■□□□ 1.95
PCDHA7Q9UN72 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHA7Q9UN72 PFN2-211ENST00000489155 636 ntTSL 4 BASIC27.25■■□□□ 1.95
PCDHA7Q9UN72 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHA7Q9UN72 PREB-202ENST00000406567 1910 ntTSL 5 BASIC27.24■■□□□ 1.95
PCDHA7Q9UN72 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHA7Q9UN72 MIR639-201ENST00000384974 98 ntBASIC27.24■■□□□ 1.95
PCDHA7Q9UN72 PVT1-219ENST00000523427 938 ntTSL 3 BASIC27.24■■□□□ 1.95
PCDHA7Q9UN72 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC27.24■■□□□ 1.95
PCDHA7Q9UN72 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHA7Q9UN72 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC27.24■■□□□ 1.95
PCDHA7Q9UN72 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
PCDHA7Q9UN72 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PCDHA7Q9UN72 SLC6A10P-202ENST00000431994 2058 ntBASIC27.23■■□□□ 1.95
PCDHA7Q9UN72 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHA7Q9UN72 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHA7Q9UN72 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHA7Q9UN72 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms