Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NOTCH3Q9UM47 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NOTCH3Q9UM47 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NOTCH3Q9UM47 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
NOTCH3Q9UM47 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.45■□□□□ 0.54
NOTCH3Q9UM47 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.45■□□□□ 0.54
NOTCH3Q9UM47 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.45■□□□□ 0.54
NOTCH3Q9UM47 MIR4787-201ENST00000607364 84 ntBASIC18.45■□□□□ 0.54
NOTCH3Q9UM47 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC18.45■□□□□ 0.54
NOTCH3Q9UM47 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NOTCH3Q9UM47 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.45■□□□□ 0.54
NOTCH3Q9UM47 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NOTCH3Q9UM47 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NOTCH3Q9UM47 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NOTCH3Q9UM47 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.44■□□□□ 0.54
NOTCH3Q9UM47 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NOTCH3Q9UM47 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NOTCH3Q9UM47 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NOTCH3Q9UM47 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NOTCH3Q9UM47 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NOTCH3Q9UM47 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NOTCH3Q9UM47 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NOTCH3Q9UM47 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
NOTCH3Q9UM47 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NOTCH3Q9UM47 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
NOTCH3Q9UM47 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NOTCH3Q9UM47 AC008406.3-201ENST00000620001 1374 ntBASIC18.42■□□□□ 0.54
NOTCH3Q9UM47 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NOTCH3Q9UM47 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.42■□□□□ 0.54
NOTCH3Q9UM47 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NOTCH3Q9UM47 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC18.42■□□□□ 0.54
NOTCH3Q9UM47 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
NOTCH3Q9UM47 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.41■□□□□ 0.54
NOTCH3Q9UM47 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
NOTCH3Q9UM47 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NOTCH3Q9UM47 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NOTCH3Q9UM47 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.41■□□□□ 0.54
NOTCH3Q9UM47 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.41■□□□□ 0.54
NOTCH3Q9UM47 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NOTCH3Q9UM47 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NOTCH3Q9UM47 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.4■□□□□ 0.54
NOTCH3Q9UM47 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NOTCH3Q9UM47 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NOTCH3Q9UM47 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
NOTCH3Q9UM47 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NOTCH3Q9UM47 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NOTCH3Q9UM47 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NOTCH3Q9UM47 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
NOTCH3Q9UM47 BX664725.1-201ENST00000438252 379 ntBASIC18.39■□□□□ 0.53
NOTCH3Q9UM47 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.39■□□□□ 0.53
NOTCH3Q9UM47 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NOTCH3Q9UM47 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NOTCH3Q9UM47 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.39■□□□□ 0.53
NOTCH3Q9UM47 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NOTCH3Q9UM47 LINC01003-201ENST00000564834 1764 ntBASIC18.39■□□□□ 0.53
NOTCH3Q9UM47 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
NOTCH3Q9UM47 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.39■□□□□ 0.53
NOTCH3Q9UM47 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
NOTCH3Q9UM47 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NOTCH3Q9UM47 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.38■□□□□ 0.53
NOTCH3Q9UM47 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NOTCH3Q9UM47 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NOTCH3Q9UM47 AL449106.1-201ENST00000608517 1980 ntBASIC18.38■□□□□ 0.53
NOTCH3Q9UM47 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.38■□□□□ 0.53
NOTCH3Q9UM47 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NOTCH3Q9UM47 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.38■□□□□ 0.53
NOTCH3Q9UM47 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NOTCH3Q9UM47 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NOTCH3Q9UM47 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
NOTCH3Q9UM47 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
NOTCH3Q9UM47 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NOTCH3Q9UM47 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NOTCH3Q9UM47 BX255925.1-201ENST00000566954 1854 ntBASIC18.37■□□□□ 0.53
NOTCH3Q9UM47 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.37■□□□□ 0.53
NOTCH3Q9UM47 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
NOTCH3Q9UM47 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NOTCH3Q9UM47 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
NOTCH3Q9UM47 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
NOTCH3Q9UM47 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NOTCH3Q9UM47 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NOTCH3Q9UM47 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NOTCH3Q9UM47 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
NOTCH3Q9UM47 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.36■□□□□ 0.53
NOTCH3Q9UM47 DRD5P2-201ENST00000421395 2012 ntBASIC18.36■□□□□ 0.53
NOTCH3Q9UM47 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.36■□□□□ 0.53
NOTCH3Q9UM47 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NOTCH3Q9UM47 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.35■□□□□ 0.53
NOTCH3Q9UM47 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NOTCH3Q9UM47 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NOTCH3Q9UM47 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NOTCH3Q9UM47 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
NOTCH3Q9UM47 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
NOTCH3Q9UM47 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NOTCH3Q9UM47 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NOTCH3Q9UM47 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NOTCH3Q9UM47 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
NOTCH3Q9UM47 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
NOTCH3Q9UM47 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.34■□□□□ 0.53
NOTCH3Q9UM47 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NOTCH3Q9UM47 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms