Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NUP50Q9UKX7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.71■□□□□ 0.91
NUP50Q9UKX7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NUP50Q9UKX7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
NUP50Q9UKX7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
NUP50Q9UKX7 AP004833.2-201ENST00000532228 1454 ntBASIC20.7■□□□□ 0.9
NUP50Q9UKX7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NUP50Q9UKX7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NUP50Q9UKX7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NUP50Q9UKX7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NUP50Q9UKX7 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.7■□□□□ 0.9
NUP50Q9UKX7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
NUP50Q9UKX7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
NUP50Q9UKX7 AC145676.1-201ENST00000514988 2004 ntBASIC20.7■□□□□ 0.9
NUP50Q9UKX7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUP50Q9UKX7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
NUP50Q9UKX7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUP50Q9UKX7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NUP50Q9UKX7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUP50Q9UKX7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.69■□□□□ 0.9
NUP50Q9UKX7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.69■□□□□ 0.9
NUP50Q9UKX7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUP50Q9UKX7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.68■□□□□ 0.9
NUP50Q9UKX7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUP50Q9UKX7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
NUP50Q9UKX7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.68■□□□□ 0.9
NUP50Q9UKX7 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NUP50Q9UKX7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
NUP50Q9UKX7 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUP50Q9UKX7 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUP50Q9UKX7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUP50Q9UKX7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.68■□□□□ 0.9
NUP50Q9UKX7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
NUP50Q9UKX7 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUP50Q9UKX7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUP50Q9UKX7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NUP50Q9UKX7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NUP50Q9UKX7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
NUP50Q9UKX7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NUP50Q9UKX7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NUP50Q9UKX7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NUP50Q9UKX7 MIR219A2-201ENST00000608502 1504 ntBASIC20.67■□□□□ 0.9
NUP50Q9UKX7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NUP50Q9UKX7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NUP50Q9UKX7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.66■□□□□ 0.9
NUP50Q9UKX7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NUP50Q9UKX7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NUP50Q9UKX7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NUP50Q9UKX7 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
NUP50Q9UKX7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
NUP50Q9UKX7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUP50Q9UKX7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUP50Q9UKX7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
NUP50Q9UKX7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.65■□□□□ 0.9
NUP50Q9UKX7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUP50Q9UKX7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUP50Q9UKX7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.65■□□□□ 0.9
NUP50Q9UKX7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUP50Q9UKX7 AC068473.5-201ENST00000616428 2072 ntBASIC20.65■□□□□ 0.9
NUP50Q9UKX7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NUP50Q9UKX7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NUP50Q9UKX7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NUP50Q9UKX7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NUP50Q9UKX7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NUP50Q9UKX7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.64■□□□□ 0.89
NUP50Q9UKX7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NUP50Q9UKX7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NUP50Q9UKX7 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NUP50Q9UKX7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NUP50Q9UKX7 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NUP50Q9UKX7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.64■□□□□ 0.89
NUP50Q9UKX7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NUP50Q9UKX7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.63■□□□□ 0.89
NUP50Q9UKX7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUP50Q9UKX7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUP50Q9UKX7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUP50Q9UKX7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
NUP50Q9UKX7 AC060814.1-201ENST00000554326 538 ntBASIC20.63■□□□□ 0.89
NUP50Q9UKX7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUP50Q9UKX7 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.62■□□□□ 0.89
NUP50Q9UKX7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
NUP50Q9UKX7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NUP50Q9UKX7 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.62■□□□□ 0.89
NUP50Q9UKX7 NTF6A-201ENST00000591175 560 ntBASIC20.62■□□□□ 0.89
NUP50Q9UKX7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
NUP50Q9UKX7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
NUP50Q9UKX7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NUP50Q9UKX7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NUP50Q9UKX7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
NUP50Q9UKX7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NUP50Q9UKX7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NUP50Q9UKX7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NUP50Q9UKX7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NUP50Q9UKX7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NUP50Q9UKX7 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NUP50Q9UKX7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.61■□□□□ 0.89
NUP50Q9UKX7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NUP50Q9UKX7 AC126177.7-201ENST00000547904 679 ntBASIC20.6■□□□□ 0.89
NUP50Q9UKX7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NUP50Q9UKX7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms