Protein–RNA interactions for Protein: Q9NZP6

NPAP1, Nuclear pore-associated protein 1, humanhuman

Predictions only

Length 1,156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAP1Q9NZP6 DUSP8P4-201ENST00000399538 1761 ntBASIC21.73■■□□□ 1.07
NPAP1Q9NZP6 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.73■■□□□ 1.07
NPAP1Q9NZP6 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.73■■□□□ 1.07
NPAP1Q9NZP6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
NPAP1Q9NZP6 AC018358.1-201ENST00000631079 1402 ntBASIC21.72■■□□□ 1.07
NPAP1Q9NZP6 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.72■■□□□ 1.07
NPAP1Q9NZP6 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
NPAP1Q9NZP6 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
NPAP1Q9NZP6 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NPAP1Q9NZP6 AL359258.2-201ENST00000564063 1566 ntBASIC21.71■■□□□ 1.07
NPAP1Q9NZP6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.71■■□□□ 1.07
NPAP1Q9NZP6 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NPAP1Q9NZP6 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
NPAP1Q9NZP6 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
NPAP1Q9NZP6 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NPAP1Q9NZP6 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NPAP1Q9NZP6 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
NPAP1Q9NZP6 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NPAP1Q9NZP6 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NPAP1Q9NZP6 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.7■■□□□ 1.06
NPAP1Q9NZP6 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NPAP1Q9NZP6 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NPAP1Q9NZP6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NPAP1Q9NZP6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NPAP1Q9NZP6 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NPAP1Q9NZP6 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NPAP1Q9NZP6 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NPAP1Q9NZP6 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
NPAP1Q9NZP6 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NPAP1Q9NZP6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NPAP1Q9NZP6 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NPAP1Q9NZP6 ECEL1P2-201ENST00000461596 1295 ntBASIC21.68■■□□□ 1.06
NPAP1Q9NZP6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
NPAP1Q9NZP6 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
NPAP1Q9NZP6 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
NPAP1Q9NZP6 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NPAP1Q9NZP6 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NPAP1Q9NZP6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.68■■□□□ 1.06
NPAP1Q9NZP6 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.68■■□□□ 1.06
NPAP1Q9NZP6 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NPAP1Q9NZP6 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NPAP1Q9NZP6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPAP1Q9NZP6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
NPAP1Q9NZP6 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.66■■□□□ 1.06
NPAP1Q9NZP6 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPAP1Q9NZP6 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NPAP1Q9NZP6 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NPAP1Q9NZP6 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NPAP1Q9NZP6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
NPAP1Q9NZP6 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NPAP1Q9NZP6 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NPAP1Q9NZP6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
NPAP1Q9NZP6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NPAP1Q9NZP6 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.64■■□□□ 1.05
NPAP1Q9NZP6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.64■■□□□ 1.05
NPAP1Q9NZP6 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NPAP1Q9NZP6 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NPAP1Q9NZP6 CLDN5-201ENST00000403084 2357 ntBASIC21.63■■□□□ 1.05
NPAP1Q9NZP6 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NPAP1Q9NZP6 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NPAP1Q9NZP6 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NPAP1Q9NZP6 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.63■■□□□ 1.05
NPAP1Q9NZP6 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NPAP1Q9NZP6 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.62■■□□□ 1.05
NPAP1Q9NZP6 NTF6A-201ENST00000591175 560 ntBASIC21.62■■□□□ 1.05
NPAP1Q9NZP6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NPAP1Q9NZP6 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NPAP1Q9NZP6 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
NPAP1Q9NZP6 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NPAP1Q9NZP6 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
NPAP1Q9NZP6 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
NPAP1Q9NZP6 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NPAP1Q9NZP6 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.61■■□□□ 1.05
NPAP1Q9NZP6 ERN1-208ENST00000606895 2068 ntBASIC21.61■■□□□ 1.05
NPAP1Q9NZP6 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.61■■□□□ 1.05
NPAP1Q9NZP6 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.61■■□□□ 1.05
NPAP1Q9NZP6 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NPAP1Q9NZP6 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
NPAP1Q9NZP6 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.61■■□□□ 1.05
NPAP1Q9NZP6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
NPAP1Q9NZP6 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.6■■□□□ 1.05
NPAP1Q9NZP6 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NPAP1Q9NZP6 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NPAP1Q9NZP6 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.6■■□□□ 1.05
NPAP1Q9NZP6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NPAP1Q9NZP6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NPAP1Q9NZP6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
NPAP1Q9NZP6 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NPAP1Q9NZP6 U85056.1-201ENST00000616429 682 ntBASIC21.59■■□□□ 1.05
NPAP1Q9NZP6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.59■■□□□ 1.05
NPAP1Q9NZP6 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.58■■□□□ 1.05
NPAP1Q9NZP6 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.58■■□□□ 1.05
NPAP1Q9NZP6 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NPAP1Q9NZP6 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NPAP1Q9NZP6 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NPAP1Q9NZP6 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NPAP1Q9NZP6 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.57■■□□□ 1.04
NPAP1Q9NZP6 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.57■■□□□ 1.04
NPAP1Q9NZP6 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
NPAP1Q9NZP6 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms