Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 KRT18P10-201ENST00000388836 1287 ntBASIC31.06■■■□□ 2.56
TFCP2L1Q9NZI6 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC31.06■■■□□ 2.56
TFCP2L1Q9NZI6 AL117332.1-201ENST00000622628 974 ntBASIC31.06■■■□□ 2.56
TFCP2L1Q9NZI6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
TFCP2L1Q9NZI6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
TFCP2L1Q9NZI6 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC31.05■■■□□ 2.56
TFCP2L1Q9NZI6 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
TFCP2L1Q9NZI6 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
TFCP2L1Q9NZI6 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
TFCP2L1Q9NZI6 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC31.04■■■□□ 2.56
TFCP2L1Q9NZI6 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC31.04■■■□□ 2.56
TFCP2L1Q9NZI6 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC31.04■■■□□ 2.56
TFCP2L1Q9NZI6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
TFCP2L1Q9NZI6 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
TFCP2L1Q9NZI6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC31.02■■■□□ 2.56
TFCP2L1Q9NZI6 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC31.02■■■□□ 2.56
TFCP2L1Q9NZI6 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC31.02■■■□□ 2.56
TFCP2L1Q9NZI6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
TFCP2L1Q9NZI6 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
TFCP2L1Q9NZI6 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
TFCP2L1Q9NZI6 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC31.02■■■□□ 2.56
TFCP2L1Q9NZI6 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31.01■■■□□ 2.56
TFCP2L1Q9NZI6 MIR3621-201ENST00000580529 85 ntBASIC31.01■■■□□ 2.55
TFCP2L1Q9NZI6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.55
TFCP2L1Q9NZI6 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC31■■■□□ 2.55
TFCP2L1Q9NZI6 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
TFCP2L1Q9NZI6 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC30.99■■■□□ 2.55
TFCP2L1Q9NZI6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
TFCP2L1Q9NZI6 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC30.99■■■□□ 2.55
TFCP2L1Q9NZI6 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC30.99■■■□□ 2.55
TFCP2L1Q9NZI6 AC010997.5-201ENST00000609182 354 ntBASIC30.98■■■□□ 2.55
TFCP2L1Q9NZI6 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC30.97■■■□□ 2.55
TFCP2L1Q9NZI6 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
TFCP2L1Q9NZI6 AC133561.4-201ENST00000566112 224 ntBASIC30.97■■■□□ 2.55
TFCP2L1Q9NZI6 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC30.97■■■□□ 2.55
TFCP2L1Q9NZI6 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
TFCP2L1Q9NZI6 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC30.97■■■□□ 2.55
TFCP2L1Q9NZI6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
TFCP2L1Q9NZI6 GUK1-205ENST00000366722 850 ntTSL 3 BASIC30.96■■■□□ 2.55
TFCP2L1Q9NZI6 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
TFCP2L1Q9NZI6 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
TFCP2L1Q9NZI6 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
TFCP2L1Q9NZI6 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
TFCP2L1Q9NZI6 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC30.95■■■□□ 2.55
TFCP2L1Q9NZI6 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
TFCP2L1Q9NZI6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC30.95■■■□□ 2.55
TFCP2L1Q9NZI6 MIR4466-201ENST00000606121 54 ntBASIC30.95■■■□□ 2.55
TFCP2L1Q9NZI6 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
TFCP2L1Q9NZI6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC30.94■■■□□ 2.54
TFCP2L1Q9NZI6 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.94■■■□□ 2.54
TFCP2L1Q9NZI6 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
TFCP2L1Q9NZI6 RARRES2P6-201ENST00000567333 442 ntBASIC30.93■■■□□ 2.54
TFCP2L1Q9NZI6 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC30.93■■■□□ 2.54
TFCP2L1Q9NZI6 AL356740.2-201ENST00000601559 647 ntBASIC30.93■■■□□ 2.54
TFCP2L1Q9NZI6 MIR6724-1-201ENST00000616420 92 ntBASIC30.93■■■□□ 2.54
TFCP2L1Q9NZI6 MIR6724-2-201ENST00000616483 92 ntBASIC30.93■■■□□ 2.54
TFCP2L1Q9NZI6 MIR6724-4-201ENST00000617390 92 ntBASIC30.93■■■□□ 2.54
TFCP2L1Q9NZI6 MIR6724-3-201ENST00000622482 92 ntBASIC30.93■■■□□ 2.54
TFCP2L1Q9NZI6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
TFCP2L1Q9NZI6 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
TFCP2L1Q9NZI6 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC30.92■■■□□ 2.54
TFCP2L1Q9NZI6 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
TFCP2L1Q9NZI6 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
TFCP2L1Q9NZI6 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
TFCP2L1Q9NZI6 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC30.91■■■□□ 2.54
TFCP2L1Q9NZI6 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC30.9■■■□□ 2.54
TFCP2L1Q9NZI6 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.9■■■□□ 2.54
TFCP2L1Q9NZI6 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
TFCP2L1Q9NZI6 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC30.9■■■□□ 2.54
TFCP2L1Q9NZI6 EBPL-204ENST00000378272 766 ntTSL 3 BASIC30.9■■■□□ 2.54
TFCP2L1Q9NZI6 ZNRF2P3-201ENST00000424200 374 ntBASIC30.9■■■□□ 2.54
TFCP2L1Q9NZI6 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC30.9■■■□□ 2.54
TFCP2L1Q9NZI6 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
TFCP2L1Q9NZI6 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC30.89■■■□□ 2.54
TFCP2L1Q9NZI6 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
TFCP2L1Q9NZI6 MTDHP2-201ENST00000601468 714 ntBASIC30.88■■■□□ 2.53
TFCP2L1Q9NZI6 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC30.88■■■□□ 2.53
TFCP2L1Q9NZI6 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
TFCP2L1Q9NZI6 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC30.88■■■□□ 2.53
TFCP2L1Q9NZI6 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
TFCP2L1Q9NZI6 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC30.87■■■□□ 2.53
TFCP2L1Q9NZI6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC30.87■■■□□ 2.53
TFCP2L1Q9NZI6 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
TFCP2L1Q9NZI6 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC30.87■■■□□ 2.53
TFCP2L1Q9NZI6 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC30.86■■■□□ 2.53
TFCP2L1Q9NZI6 MIR4281-201ENST00000580852 62 ntBASIC30.86■■■□□ 2.53
TFCP2L1Q9NZI6 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC30.86■■■□□ 2.53
TFCP2L1Q9NZI6 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC30.85■■■□□ 2.53
TFCP2L1Q9NZI6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC30.85■■■□□ 2.53
TFCP2L1Q9NZI6 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
TFCP2L1Q9NZI6 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC30.85■■■□□ 2.53
TFCP2L1Q9NZI6 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC30.85■■■□□ 2.53
TFCP2L1Q9NZI6 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC30.84■■■□□ 2.53
TFCP2L1Q9NZI6 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC30.84■■■□□ 2.53
TFCP2L1Q9NZI6 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.84■■■□□ 2.53
TFCP2L1Q9NZI6 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
TFCP2L1Q9NZI6 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC30.83■■■□□ 2.53
TFCP2L1Q9NZI6 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC30.83■■■□□ 2.53
TFCP2L1Q9NZI6 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC30.82■■■□□ 2.53
TFCP2L1Q9NZI6 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms