Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GCM1Q9NP62 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
GCM1Q9NP62 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
GCM1Q9NP62 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
GCM1Q9NP62 AC129492.7-201ENST00000622992 756 ntBASIC20.44■□□□□ 0.86
GCM1Q9NP62 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GCM1Q9NP62 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GCM1Q9NP62 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GCM1Q9NP62 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GCM1Q9NP62 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
GCM1Q9NP62 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GCM1Q9NP62 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GCM1Q9NP62 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
GCM1Q9NP62 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.42■□□□□ 0.86
GCM1Q9NP62 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
GCM1Q9NP62 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.42■□□□□ 0.86
GCM1Q9NP62 AC012354.3-201ENST00000623734 483 ntBASIC20.42■□□□□ 0.86
GCM1Q9NP62 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GCM1Q9NP62 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.42■□□□□ 0.86
GCM1Q9NP62 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
GCM1Q9NP62 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
GCM1Q9NP62 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.42■□□□□ 0.86
GCM1Q9NP62 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
GCM1Q9NP62 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.41■□□□□ 0.86
GCM1Q9NP62 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GCM1Q9NP62 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GCM1Q9NP62 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GCM1Q9NP62 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GCM1Q9NP62 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.4■□□□□ 0.86
GCM1Q9NP62 SPCS2P3-201ENST00000500401 656 ntBASIC20.4■□□□□ 0.86
GCM1Q9NP62 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
GCM1Q9NP62 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GCM1Q9NP62 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GCM1Q9NP62 DUX4L9-201ENST00000449051 1259 ntBASIC20.39■□□□□ 0.85
GCM1Q9NP62 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
GCM1Q9NP62 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
GCM1Q9NP62 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GCM1Q9NP62 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GCM1Q9NP62 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.38■□□□□ 0.85
GCM1Q9NP62 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GCM1Q9NP62 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GCM1Q9NP62 AC004987.1-201ENST00000428627 508 ntBASIC20.38■□□□□ 0.85
GCM1Q9NP62 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GCM1Q9NP62 AC018755.3-202ENST00000596210 929 ntBASIC20.38■□□□□ 0.85
GCM1Q9NP62 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GCM1Q9NP62 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.38■□□□□ 0.85
GCM1Q9NP62 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
GCM1Q9NP62 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GCM1Q9NP62 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GCM1Q9NP62 ATP5G2P3-201ENST00000429083 425 ntBASIC20.37■□□□□ 0.85
GCM1Q9NP62 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GCM1Q9NP62 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
GCM1Q9NP62 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
GCM1Q9NP62 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GCM1Q9NP62 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GCM1Q9NP62 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
GCM1Q9NP62 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GCM1Q9NP62 TSPY13P-201ENST00000338964 914 ntBASIC20.36■□□□□ 0.85
GCM1Q9NP62 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.36■□□□□ 0.85
GCM1Q9NP62 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.36■□□□□ 0.85
GCM1Q9NP62 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.35■□□□□ 0.85
GCM1Q9NP62 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GCM1Q9NP62 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
GCM1Q9NP62 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
GCM1Q9NP62 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GCM1Q9NP62 AC092803.2-201ENST00000564287 1899 ntBASIC20.35■□□□□ 0.85
GCM1Q9NP62 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
GCM1Q9NP62 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
GCM1Q9NP62 MIR6765-201ENST00000614092 87 ntBASIC20.35■□□□□ 0.85
GCM1Q9NP62 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.35■□□□□ 0.85
GCM1Q9NP62 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.35■□□□□ 0.85
GCM1Q9NP62 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GCM1Q9NP62 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.34■□□□□ 0.85
GCM1Q9NP62 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.34■□□□□ 0.85
GCM1Q9NP62 AL033527.3-201ENST00000566366 1196 ntBASIC20.34■□□□□ 0.85
GCM1Q9NP62 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GCM1Q9NP62 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
GCM1Q9NP62 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.34■□□□□ 0.85
GCM1Q9NP62 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
GCM1Q9NP62 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GCM1Q9NP62 DUX4L18-201ENST00000553347 1267 ntBASIC20.33■□□□□ 0.85
GCM1Q9NP62 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GCM1Q9NP62 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
GCM1Q9NP62 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.33■□□□□ 0.84
GCM1Q9NP62 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GCM1Q9NP62 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GCM1Q9NP62 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
GCM1Q9NP62 ERN1-208ENST00000606895 2068 ntBASIC20.32■□□□□ 0.84
GCM1Q9NP62 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GCM1Q9NP62 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GCM1Q9NP62 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
GCM1Q9NP62 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GCM1Q9NP62 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
GCM1Q9NP62 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GCM1Q9NP62 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
GCM1Q9NP62 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GCM1Q9NP62 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GCM1Q9NP62 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GCM1Q9NP62 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GCM1Q9NP62 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms