Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.23■■□□□ 1.79
CDT1Q9H211 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CDT1Q9H211 AC087393.1-201ENST00000582896 145 ntBASIC26.23■■□□□ 1.79
CDT1Q9H211 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26.23■■□□□ 1.79
CDT1Q9H211 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CDT1Q9H211 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC26.22■■□□□ 1.79
CDT1Q9H211 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CDT1Q9H211 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.22■■□□□ 1.79
CDT1Q9H211 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CDT1Q9H211 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CDT1Q9H211 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
CDT1Q9H211 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.22■■□□□ 1.79
CDT1Q9H211 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
CDT1Q9H211 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CDT1Q9H211 BEX3-202ENST00000372634 753 ntTSL 2 BASIC26.21■■□□□ 1.79
CDT1Q9H211 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
CDT1Q9H211 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC26.21■■□□□ 1.79
CDT1Q9H211 PVT1_1.1-201ENST00000615125 194 ntBASIC26.21■■□□□ 1.79
CDT1Q9H211 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CDT1Q9H211 AC074183.2-201ENST00000623112 922 ntBASIC26.21■■□□□ 1.79
CDT1Q9H211 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
CDT1Q9H211 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
CDT1Q9H211 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CDT1Q9H211 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
CDT1Q9H211 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CDT1Q9H211 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CDT1Q9H211 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CDT1Q9H211 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
CDT1Q9H211 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC26.19■■□□□ 1.78
CDT1Q9H211 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CDT1Q9H211 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CDT1Q9H211 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CDT1Q9H211 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CDT1Q9H211 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
CDT1Q9H211 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC26.18■■□□□ 1.78
CDT1Q9H211 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CDT1Q9H211 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC26.18■■□□□ 1.78
CDT1Q9H211 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.18■■□□□ 1.78
CDT1Q9H211 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CDT1Q9H211 RARRES2P1-201ENST00000474487 481 ntBASIC26.17■■□□□ 1.78
CDT1Q9H211 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CDT1Q9H211 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
CDT1Q9H211 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CDT1Q9H211 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CDT1Q9H211 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CDT1Q9H211 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CDT1Q9H211 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC26.16■■□□□ 1.78
CDT1Q9H211 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
CDT1Q9H211 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CDT1Q9H211 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CDT1Q9H211 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.15■■□□□ 1.78
CDT1Q9H211 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC26.15■■□□□ 1.78
CDT1Q9H211 KRT18P10-201ENST00000388836 1287 ntBASIC26.15■■□□□ 1.78
CDT1Q9H211 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CDT1Q9H211 ERN1-208ENST00000606895 2068 ntBASIC26.15■■□□□ 1.78
CDT1Q9H211 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CDT1Q9H211 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CDT1Q9H211 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CDT1Q9H211 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CDT1Q9H211 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC26.14■■□□□ 1.78
CDT1Q9H211 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CDT1Q9H211 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.14■■□□□ 1.77
CDT1Q9H211 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CDT1Q9H211 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
CDT1Q9H211 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC26.13■■□□□ 1.77
CDT1Q9H211 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CDT1Q9H211 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CDT1Q9H211 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CDT1Q9H211 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
CDT1Q9H211 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.13■■□□□ 1.77
CDT1Q9H211 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.12■■□□□ 1.77
CDT1Q9H211 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.12■■□□□ 1.77
CDT1Q9H211 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
CDT1Q9H211 IDNK-201ENST00000376417 511 ntTSL 5 BASIC26.12■■□□□ 1.77
CDT1Q9H211 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CDT1Q9H211 LONRF2P2-201ENST00000439212 571 ntBASIC26.12■■□□□ 1.77
CDT1Q9H211 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC26.12■■□□□ 1.77
CDT1Q9H211 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
CDT1Q9H211 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CDT1Q9H211 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CDT1Q9H211 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CDT1Q9H211 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CDT1Q9H211 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC26.11■■□□□ 1.77
CDT1Q9H211 KRT8P33-201ENST00000508125 1423 ntBASIC26.11■■□□□ 1.77
CDT1Q9H211 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
CDT1Q9H211 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.1■■□□□ 1.77
CDT1Q9H211 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC26.1■■□□□ 1.77
CDT1Q9H211 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC26.1■■□□□ 1.77
CDT1Q9H211 MTX2-204ENST00000443241 799 ntTSL 3 BASIC26.1■■□□□ 1.77
CDT1Q9H211 AC103834.1-201ENST00000520383 144 ntBASIC26.1■■□□□ 1.77
CDT1Q9H211 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CDT1Q9H211 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CDT1Q9H211 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26.09■■□□□ 1.77
CDT1Q9H211 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC26.09■■□□□ 1.77
CDT1Q9H211 AC019171.1-201ENST00000601251 1056 ntBASIC26.09■■□□□ 1.77
CDT1Q9H211 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.09■■□□□ 1.77
CDT1Q9H211 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.09■■□□□ 1.77
CDT1Q9H211 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
CDT1Q9H211 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CDT1Q9H211 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms