Protein–RNA interactions for Protein: Q9BWW7

SCRT1, Transcriptional repressor scratch 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1Q9BWW7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SCRT1Q9BWW7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCRT1Q9BWW7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCRT1Q9BWW7 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCRT1Q9BWW7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.18■□□□□ 0.66
SCRT1Q9BWW7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCRT1Q9BWW7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCRT1Q9BWW7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCRT1Q9BWW7 WHAMMP3-201ENST00000611636 1609 ntBASIC19.18■□□□□ 0.66
SCRT1Q9BWW7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCRT1Q9BWW7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SCRT1Q9BWW7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.17■□□□□ 0.66
SCRT1Q9BWW7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCRT1Q9BWW7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCRT1Q9BWW7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC19.17■□□□□ 0.66
SCRT1Q9BWW7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SCRT1Q9BWW7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SCRT1Q9BWW7 AC142472.1-201ENST00000612013 1741 ntBASIC19.17■□□□□ 0.66
SCRT1Q9BWW7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SCRT1Q9BWW7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC19.16■□□□□ 0.66
SCRT1Q9BWW7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SCRT1Q9BWW7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCRT1Q9BWW7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCRT1Q9BWW7 AC087741.3-201ENST00000624270 1347 ntBASIC19.16■□□□□ 0.66
SCRT1Q9BWW7 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCRT1Q9BWW7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCRT1Q9BWW7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SCRT1Q9BWW7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCRT1Q9BWW7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.15■□□□□ 0.66
SCRT1Q9BWW7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCRT1Q9BWW7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.15■□□□□ 0.66
SCRT1Q9BWW7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCRT1Q9BWW7 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCRT1Q9BWW7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
SCRT1Q9BWW7 LINC01124-201ENST00000409786 2117 ntBASIC19.15■□□□□ 0.66
SCRT1Q9BWW7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCRT1Q9BWW7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCRT1Q9BWW7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.66
SCRT1Q9BWW7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCRT1Q9BWW7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.14■□□□□ 0.65
SCRT1Q9BWW7 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCRT1Q9BWW7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCRT1Q9BWW7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCRT1Q9BWW7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SCRT1Q9BWW7 AC110285.7-201ENST00000624417 1536 ntBASIC19.14■□□□□ 0.65
SCRT1Q9BWW7 DUSP8P5-201ENST00000422884 1815 ntBASIC19.14■□□□□ 0.65
SCRT1Q9BWW7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCRT1Q9BWW7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCRT1Q9BWW7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SCRT1Q9BWW7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCRT1Q9BWW7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.13■□□□□ 0.65
SCRT1Q9BWW7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.13■□□□□ 0.65
SCRT1Q9BWW7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SCRT1Q9BWW7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SCRT1Q9BWW7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.12■□□□□ 0.65
SCRT1Q9BWW7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCRT1Q9BWW7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.12■□□□□ 0.65
SCRT1Q9BWW7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.12■□□□□ 0.65
SCRT1Q9BWW7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCRT1Q9BWW7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCRT1Q9BWW7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SCRT1Q9BWW7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SCRT1Q9BWW7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SCRT1Q9BWW7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SCRT1Q9BWW7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCRT1Q9BWW7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SCRT1Q9BWW7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCRT1Q9BWW7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCRT1Q9BWW7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCRT1Q9BWW7 AC096887.2-201ENST00000623443 1957 ntBASIC19.11■□□□□ 0.65
SCRT1Q9BWW7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.11■□□□□ 0.65
SCRT1Q9BWW7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.11■□□□□ 0.65
SCRT1Q9BWW7 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.11■□□□□ 0.65
SCRT1Q9BWW7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCRT1Q9BWW7 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.11■□□□□ 0.65
SCRT1Q9BWW7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.11■□□□□ 0.65
SCRT1Q9BWW7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
SCRT1Q9BWW7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCRT1Q9BWW7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCRT1Q9BWW7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCRT1Q9BWW7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.1■□□□□ 0.65
SCRT1Q9BWW7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCRT1Q9BWW7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.1■□□□□ 0.65
SCRT1Q9BWW7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.1■□□□□ 0.65
SCRT1Q9BWW7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCRT1Q9BWW7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCRT1Q9BWW7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.1■□□□□ 0.65
SCRT1Q9BWW7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SCRT1Q9BWW7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
SCRT1Q9BWW7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.09■□□□□ 0.65
SCRT1Q9BWW7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SCRT1Q9BWW7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCRT1Q9BWW7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCRT1Q9BWW7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SCRT1Q9BWW7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.09■□□□□ 0.65
SCRT1Q9BWW7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.09■□□□□ 0.65
SCRT1Q9BWW7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SCRT1Q9BWW7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SCRT1Q9BWW7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SCRT1Q9BWW7 AC044849.2-201ENST00000606596 710 ntBASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms