Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NICN1Q9BSH3 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NICN1Q9BSH3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
NICN1Q9BSH3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NICN1Q9BSH3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
NICN1Q9BSH3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NICN1Q9BSH3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NICN1Q9BSH3 HLA-V-202ENST00000446817 847 ntBASIC20.48■□□□□ 0.87
NICN1Q9BSH3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
NICN1Q9BSH3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
NICN1Q9BSH3 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.48■□□□□ 0.87
NICN1Q9BSH3 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
NICN1Q9BSH3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NICN1Q9BSH3 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NICN1Q9BSH3 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
NICN1Q9BSH3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NICN1Q9BSH3 DUX4L11-201ENST00000611504 1267 ntBASIC20.47■□□□□ 0.87
NICN1Q9BSH3 DUX4L12-201ENST00000614593 1267 ntBASIC20.47■□□□□ 0.87
NICN1Q9BSH3 DUX4L14-201ENST00000621227 1267 ntBASIC20.47■□□□□ 0.87
NICN1Q9BSH3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NICN1Q9BSH3 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NICN1Q9BSH3 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NICN1Q9BSH3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NICN1Q9BSH3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NICN1Q9BSH3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NICN1Q9BSH3 RPS2P35-201ENST00000443417 897 ntBASIC20.46■□□□□ 0.87
NICN1Q9BSH3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NICN1Q9BSH3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.46■□□□□ 0.87
NICN1Q9BSH3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NICN1Q9BSH3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NICN1Q9BSH3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NICN1Q9BSH3 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NICN1Q9BSH3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
NICN1Q9BSH3 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NICN1Q9BSH3 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
NICN1Q9BSH3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.45■□□□□ 0.86
NICN1Q9BSH3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.45■□□□□ 0.86
NICN1Q9BSH3 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NICN1Q9BSH3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NICN1Q9BSH3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NICN1Q9BSH3 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NICN1Q9BSH3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NICN1Q9BSH3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NICN1Q9BSH3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NICN1Q9BSH3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NICN1Q9BSH3 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NICN1Q9BSH3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
NICN1Q9BSH3 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NICN1Q9BSH3 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NICN1Q9BSH3 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
NICN1Q9BSH3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.44■□□□□ 0.86
NICN1Q9BSH3 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NICN1Q9BSH3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.43■□□□□ 0.86
NICN1Q9BSH3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NICN1Q9BSH3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NICN1Q9BSH3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NICN1Q9BSH3 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NICN1Q9BSH3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NICN1Q9BSH3 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.43■□□□□ 0.86
NICN1Q9BSH3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.43■□□□□ 0.86
NICN1Q9BSH3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
NICN1Q9BSH3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NICN1Q9BSH3 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.42■□□□□ 0.86
NICN1Q9BSH3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.42■□□□□ 0.86
NICN1Q9BSH3 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.42■□□□□ 0.86
NICN1Q9BSH3 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NICN1Q9BSH3 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NICN1Q9BSH3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NICN1Q9BSH3 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NICN1Q9BSH3 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.41■□□□□ 0.86
NICN1Q9BSH3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NICN1Q9BSH3 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.41■□□□□ 0.86
NICN1Q9BSH3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NICN1Q9BSH3 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NICN1Q9BSH3 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.41■□□□□ 0.86
NICN1Q9BSH3 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.41■□□□□ 0.86
NICN1Q9BSH3 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NICN1Q9BSH3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NICN1Q9BSH3 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NICN1Q9BSH3 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NICN1Q9BSH3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NICN1Q9BSH3 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NICN1Q9BSH3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NICN1Q9BSH3 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NICN1Q9BSH3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NICN1Q9BSH3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NICN1Q9BSH3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NICN1Q9BSH3 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NICN1Q9BSH3 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NICN1Q9BSH3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.4■□□□□ 0.86
NICN1Q9BSH3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NICN1Q9BSH3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NICN1Q9BSH3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
NICN1Q9BSH3 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
NICN1Q9BSH3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
NICN1Q9BSH3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NICN1Q9BSH3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.38■□□□□ 0.85
NICN1Q9BSH3 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
NICN1Q9BSH3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
NICN1Q9BSH3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms