Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RAB40CQ96S21 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB40CQ96S21 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB40CQ96S21 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB40CQ96S21 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB40CQ96S21 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RAB40CQ96S21 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAB40CQ96S21 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB40CQ96S21 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB40CQ96S21 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB40CQ96S21 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB40CQ96S21 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAB40CQ96S21 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RAB40CQ96S21 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.36■□□□□ 0.69
RAB40CQ96S21 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
RAB40CQ96S21 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
RAB40CQ96S21 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB40CQ96S21 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB40CQ96S21 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB40CQ96S21 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB40CQ96S21 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB40CQ96S21 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB40CQ96S21 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.34■□□□□ 0.69
RAB40CQ96S21 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.34■□□□□ 0.69
RAB40CQ96S21 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RAB40CQ96S21 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB40CQ96S21 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAB40CQ96S21 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAB40CQ96S21 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.33■□□□□ 0.69
RAB40CQ96S21 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAB40CQ96S21 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RAB40CQ96S21 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAB40CQ96S21 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB40CQ96S21 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB40CQ96S21 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
RAB40CQ96S21 AC044849.2-201ENST00000606596 710 ntBASIC19.33■□□□□ 0.68
RAB40CQ96S21 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB40CQ96S21 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB40CQ96S21 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.33■□□□□ 0.68
RAB40CQ96S21 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB40CQ96S21 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB40CQ96S21 AC133561.1-201ENST00000568600 2415 ntBASIC19.33■□□□□ 0.68
RAB40CQ96S21 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RAB40CQ96S21 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB40CQ96S21 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
RAB40CQ96S21 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB40CQ96S21 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB40CQ96S21 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB40CQ96S21 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB40CQ96S21 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB40CQ96S21 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB40CQ96S21 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB40CQ96S21 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB40CQ96S21 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB40CQ96S21 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB40CQ96S21 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB40CQ96S21 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RAB40CQ96S21 RPS2P35-201ENST00000443417 897 ntBASIC19.31■□□□□ 0.68
RAB40CQ96S21 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RAB40CQ96S21 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.31■□□□□ 0.68
RAB40CQ96S21 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB40CQ96S21 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RAB40CQ96S21 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RAB40CQ96S21 AC097639.1-201ENST00000565519 1891 ntBASIC19.31■□□□□ 0.68
RAB40CQ96S21 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.3■□□□□ 0.68
RAB40CQ96S21 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.3■□□□□ 0.68
RAB40CQ96S21 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RAB40CQ96S21 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB40CQ96S21 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.3■□□□□ 0.68
RAB40CQ96S21 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB40CQ96S21 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RAB40CQ96S21 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RAB40CQ96S21 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB40CQ96S21 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RAB40CQ96S21 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB40CQ96S21 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RAB40CQ96S21 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB40CQ96S21 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB40CQ96S21 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
RAB40CQ96S21 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RAB40CQ96S21 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.29■□□□□ 0.68
RAB40CQ96S21 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB40CQ96S21 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB40CQ96S21 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.29■□□□□ 0.68
RAB40CQ96S21 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
RAB40CQ96S21 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.29■□□□□ 0.68
RAB40CQ96S21 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB40CQ96S21 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB40CQ96S21 LINC00543-201ENST00000567234 1845 ntBASIC19.28■□□□□ 0.68
RAB40CQ96S21 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RAB40CQ96S21 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB40CQ96S21 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB40CQ96S21 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB40CQ96S21 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.28■□□□□ 0.68
RAB40CQ96S21 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RAB40CQ96S21 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RAB40CQ96S21 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.27■□□□□ 0.68
RAB40CQ96S21 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
RAB40CQ96S21 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB40CQ96S21 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms