Protein–RNA interactions for Protein: Q96NJ6

ZFP3, Zinc finger protein 3 homolog, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFP3Q96NJ6 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ZFP3Q96NJ6 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ZFP3Q96NJ6 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ZFP3Q96NJ6 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
ZFP3Q96NJ6 AC020928.2-201ENST00000588717 2197 ntBASIC21.87■■□□□ 1.09
ZFP3Q96NJ6 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
ZFP3Q96NJ6 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ZFP3Q96NJ6 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ZFP3Q96NJ6 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
ZFP3Q96NJ6 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ZFP3Q96NJ6 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.86■■□□□ 1.09
ZFP3Q96NJ6 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ZFP3Q96NJ6 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
ZFP3Q96NJ6 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ZFP3Q96NJ6 AL359504.2-201ENST00000605506 1601 ntBASIC21.85■■□□□ 1.09
ZFP3Q96NJ6 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
ZFP3Q96NJ6 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.85■■□□□ 1.09
ZFP3Q96NJ6 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
ZFP3Q96NJ6 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
ZFP3Q96NJ6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ZFP3Q96NJ6 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
ZFP3Q96NJ6 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ZFP3Q96NJ6 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
ZFP3Q96NJ6 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
ZFP3Q96NJ6 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
ZFP3Q96NJ6 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
ZFP3Q96NJ6 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.83■■□□□ 1.09
ZFP3Q96NJ6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ZFP3Q96NJ6 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
ZFP3Q96NJ6 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ZFP3Q96NJ6 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ZFP3Q96NJ6 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.82■■□□□ 1.08
ZFP3Q96NJ6 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.82■■□□□ 1.08
ZFP3Q96NJ6 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
ZFP3Q96NJ6 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
ZFP3Q96NJ6 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.81■■□□□ 1.08
ZFP3Q96NJ6 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZFP3Q96NJ6 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ZFP3Q96NJ6 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.8■■□□□ 1.08
ZFP3Q96NJ6 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
ZFP3Q96NJ6 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ZFP3Q96NJ6 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ZFP3Q96NJ6 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZFP3Q96NJ6 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.79■■□□□ 1.08
ZFP3Q96NJ6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.79■■□□□ 1.08
ZFP3Q96NJ6 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZFP3Q96NJ6 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZFP3Q96NJ6 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZFP3Q96NJ6 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZFP3Q96NJ6 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.79■■□□□ 1.08
ZFP3Q96NJ6 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ZFP3Q96NJ6 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.79■■□□□ 1.08
ZFP3Q96NJ6 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.79■■□□□ 1.08
ZFP3Q96NJ6 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.79■■□□□ 1.08
ZFP3Q96NJ6 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
ZFP3Q96NJ6 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.79■■□□□ 1.08
ZFP3Q96NJ6 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZFP3Q96NJ6 AC145676.1-201ENST00000514988 2004 ntBASIC21.79■■□□□ 1.08
ZFP3Q96NJ6 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ZFP3Q96NJ6 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ZFP3Q96NJ6 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZFP3Q96NJ6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.78■■□□□ 1.08
ZFP3Q96NJ6 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZFP3Q96NJ6 DUX4L9-201ENST00000449051 1259 ntBASIC21.78■■□□□ 1.08
ZFP3Q96NJ6 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
ZFP3Q96NJ6 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZFP3Q96NJ6 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.78■■□□□ 1.08
ZFP3Q96NJ6 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZFP3Q96NJ6 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.76■■□□□ 1.07
ZFP3Q96NJ6 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZFP3Q96NJ6 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZFP3Q96NJ6 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.76■■□□□ 1.07
ZFP3Q96NJ6 AC074183.2-201ENST00000623112 922 ntBASIC21.76■■□□□ 1.07
ZFP3Q96NJ6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
ZFP3Q96NJ6 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZFP3Q96NJ6 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZFP3Q96NJ6 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
ZFP3Q96NJ6 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ZFP3Q96NJ6 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ZFP3Q96NJ6 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.75■■□□□ 1.07
ZFP3Q96NJ6 DUX4L18-201ENST00000553347 1267 ntBASIC21.75■■□□□ 1.07
ZFP3Q96NJ6 AC018755.3-202ENST00000596210 929 ntBASIC21.75■■□□□ 1.07
ZFP3Q96NJ6 MIR6765-201ENST00000614092 87 ntBASIC21.75■■□□□ 1.07
ZFP3Q96NJ6 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZFP3Q96NJ6 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.75■■□□□ 1.07
ZFP3Q96NJ6 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ZFP3Q96NJ6 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZFP3Q96NJ6 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.74■■□□□ 1.07
ZFP3Q96NJ6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ZFP3Q96NJ6 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ZFP3Q96NJ6 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.74■■□□□ 1.07
ZFP3Q96NJ6 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.74■■□□□ 1.07
ZFP3Q96NJ6 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ZFP3Q96NJ6 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ZFP3Q96NJ6 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ZFP3Q96NJ6 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ZFP3Q96NJ6 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ZFP3Q96NJ6 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.73■■□□□ 1.07
ZFP3Q96NJ6 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ZFP3Q96NJ6 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms