Protein–RNA interactions for Protein: Q96MP5

ZSWIM3, Zinc finger SWIM domain-containing protein 3, humanhuman

Predictions only

Length 696 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3Q96MP5 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
ZSWIM3Q96MP5 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
ZSWIM3Q96MP5 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
ZSWIM3Q96MP5 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.13■■□□□ 1.61
ZSWIM3Q96MP5 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
ZSWIM3Q96MP5 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ZSWIM3Q96MP5 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ZSWIM3Q96MP5 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
ZSWIM3Q96MP5 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
ZSWIM3Q96MP5 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
ZSWIM3Q96MP5 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC25.11■■□□□ 1.61
ZSWIM3Q96MP5 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC25.11■■□□□ 1.61
ZSWIM3Q96MP5 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
ZSWIM3Q96MP5 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
ZSWIM3Q96MP5 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
ZSWIM3Q96MP5 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC25.1■■□□□ 1.61
ZSWIM3Q96MP5 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
ZSWIM3Q96MP5 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.1■■□□□ 1.61
ZSWIM3Q96MP5 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
ZSWIM3Q96MP5 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
ZSWIM3Q96MP5 AC142472.1-201ENST00000612013 1741 ntBASIC25.09■■□□□ 1.61
ZSWIM3Q96MP5 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ZSWIM3Q96MP5 Z92544.1-202ENST00000571933 1220 ntBASIC25.09■■□□□ 1.61
ZSWIM3Q96MP5 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
ZSWIM3Q96MP5 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC25.08■■□□□ 1.61
ZSWIM3Q96MP5 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC25.08■■□□□ 1.61
ZSWIM3Q96MP5 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
ZSWIM3Q96MP5 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC25.07■■□□□ 1.6
ZSWIM3Q96MP5 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
ZSWIM3Q96MP5 KRT18P10-201ENST00000388836 1287 ntBASIC25.07■■□□□ 1.6
ZSWIM3Q96MP5 CREM-229ENST00000474362 1030 ntTSL 2 BASIC25.07■■□□□ 1.6
ZSWIM3Q96MP5 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC25.07■■□□□ 1.6
ZSWIM3Q96MP5 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ZSWIM3Q96MP5 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
ZSWIM3Q96MP5 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
ZSWIM3Q96MP5 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC25.06■■□□□ 1.6
ZSWIM3Q96MP5 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
ZSWIM3Q96MP5 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC25.05■■□□□ 1.6
ZSWIM3Q96MP5 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC25.05■■□□□ 1.6
ZSWIM3Q96MP5 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC25.05■■□□□ 1.6
ZSWIM3Q96MP5 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC25.04■■□□□ 1.6
ZSWIM3Q96MP5 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
ZSWIM3Q96MP5 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
ZSWIM3Q96MP5 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
ZSWIM3Q96MP5 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC25.04■■□□□ 1.6
ZSWIM3Q96MP5 AC022616.5-201ENST00000518796 181 ntBASIC25.04■■□□□ 1.6
ZSWIM3Q96MP5 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
ZSWIM3Q96MP5 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
ZSWIM3Q96MP5 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
ZSWIM3Q96MP5 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC25.04■■□□□ 1.6
ZSWIM3Q96MP5 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
ZSWIM3Q96MP5 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
ZSWIM3Q96MP5 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
ZSWIM3Q96MP5 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ZSWIM3Q96MP5 AP004609.3-201ENST00000610705 1884 ntBASIC25.03■■□□□ 1.6
ZSWIM3Q96MP5 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ZSWIM3Q96MP5 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
ZSWIM3Q96MP5 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
ZSWIM3Q96MP5 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC25.03■■□□□ 1.6
ZSWIM3Q96MP5 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC25.03■■□□□ 1.6
ZSWIM3Q96MP5 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ZSWIM3Q96MP5 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC25.02■■□□□ 1.6
ZSWIM3Q96MP5 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC25.02■■□□□ 1.6
ZSWIM3Q96MP5 KRT18P24-201ENST00000344739 1156 ntBASIC25.01■■□□□ 1.59
ZSWIM3Q96MP5 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
ZSWIM3Q96MP5 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
ZSWIM3Q96MP5 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.01■■□□□ 1.59
ZSWIM3Q96MP5 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC25■■□□□ 1.59
ZSWIM3Q96MP5 MIR4787-201ENST00000607364 84 ntBASIC25■■□□□ 1.59
ZSWIM3Q96MP5 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
ZSWIM3Q96MP5 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ZSWIM3Q96MP5 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ZSWIM3Q96MP5 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
ZSWIM3Q96MP5 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
ZSWIM3Q96MP5 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
ZSWIM3Q96MP5 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
ZSWIM3Q96MP5 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC24.99■■□□□ 1.59
ZSWIM3Q96MP5 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
ZSWIM3Q96MP5 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
ZSWIM3Q96MP5 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.98■■□□□ 1.59
ZSWIM3Q96MP5 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ZSWIM3Q96MP5 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC24.98■■□□□ 1.59
ZSWIM3Q96MP5 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC24.98■■□□□ 1.59
ZSWIM3Q96MP5 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
ZSWIM3Q96MP5 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC24.98■■□□□ 1.59
ZSWIM3Q96MP5 KRT125P-201ENST00000546827 989 ntBASIC24.98■■□□□ 1.59
ZSWIM3Q96MP5 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.98■■□□□ 1.59
ZSWIM3Q96MP5 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ZSWIM3Q96MP5 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.98■■□□□ 1.59
ZSWIM3Q96MP5 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
ZSWIM3Q96MP5 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.97■■□□□ 1.59
ZSWIM3Q96MP5 BX664725.1-201ENST00000438252 379 ntBASIC24.97■■□□□ 1.59
ZSWIM3Q96MP5 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
ZSWIM3Q96MP5 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
ZSWIM3Q96MP5 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
ZSWIM3Q96MP5 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.96■■□□□ 1.59
ZSWIM3Q96MP5 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC24.96■■□□□ 1.59
ZSWIM3Q96MP5 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC24.96■■□□□ 1.59
ZSWIM3Q96MP5 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
ZSWIM3Q96MP5 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms