Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC19.35■□□□□ 0.69
RITA1Q96K30 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RITA1Q96K30 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.35■□□□□ 0.69
RITA1Q96K30 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RITA1Q96K30 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RITA1Q96K30 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.34■□□□□ 0.69
RITA1Q96K30 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RITA1Q96K30 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.34■□□□□ 0.69
RITA1Q96K30 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RITA1Q96K30 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RITA1Q96K30 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RITA1Q96K30 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
RITA1Q96K30 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RITA1Q96K30 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
RITA1Q96K30 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
RITA1Q96K30 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
RITA1Q96K30 AC026202.3-201ENST00000600805 1127 ntBASIC19.33■□□□□ 0.68
RITA1Q96K30 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RITA1Q96K30 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RITA1Q96K30 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RITA1Q96K30 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RITA1Q96K30 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.32■□□□□ 0.68
RITA1Q96K30 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
RITA1Q96K30 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RITA1Q96K30 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RITA1Q96K30 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RITA1Q96K30 RARRES2P2-201ENST00000394842 485 ntBASIC19.31■□□□□ 0.68
RITA1Q96K30 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.31■□□□□ 0.68
RITA1Q96K30 RAP2CP1-202ENST00000605179 643 ntBASIC19.31■□□□□ 0.68
RITA1Q96K30 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RITA1Q96K30 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.3■□□□□ 0.68
RITA1Q96K30 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RITA1Q96K30 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RITA1Q96K30 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.29■□□□□ 0.68
RITA1Q96K30 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.29■□□□□ 0.68
RITA1Q96K30 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RITA1Q96K30 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RITA1Q96K30 AC009831.1-201ENST00000580420 1582 ntBASIC19.29■□□□□ 0.68
RITA1Q96K30 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.29■□□□□ 0.68
RITA1Q96K30 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.29■□□□□ 0.68
RITA1Q96K30 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RITA1Q96K30 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RITA1Q96K30 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RITA1Q96K30 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RITA1Q96K30 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
RITA1Q96K30 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RITA1Q96K30 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RITA1Q96K30 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.28■□□□□ 0.68
RITA1Q96K30 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RITA1Q96K30 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RITA1Q96K30 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RITA1Q96K30 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.27■□□□□ 0.68
RITA1Q96K30 AC133552.2-201ENST00000619106 1032 ntBASIC19.27■□□□□ 0.68
RITA1Q96K30 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RITA1Q96K30 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.27■□□□□ 0.68
RITA1Q96K30 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
RITA1Q96K30 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RITA1Q96K30 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RITA1Q96K30 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.26■□□□□ 0.67
RITA1Q96K30 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RITA1Q96K30 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RITA1Q96K30 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.26■□□□□ 0.67
RITA1Q96K30 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RITA1Q96K30 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RITA1Q96K30 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
RITA1Q96K30 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.25■□□□□ 0.67
RITA1Q96K30 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.25■□□□□ 0.67
RITA1Q96K30 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RITA1Q96K30 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RITA1Q96K30 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RITA1Q96K30 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RITA1Q96K30 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RITA1Q96K30 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RITA1Q96K30 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RITA1Q96K30 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RITA1Q96K30 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RITA1Q96K30 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
RITA1Q96K30 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RITA1Q96K30 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RITA1Q96K30 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RITA1Q96K30 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RITA1Q96K30 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.23■□□□□ 0.67
RITA1Q96K30 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RITA1Q96K30 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RITA1Q96K30 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RITA1Q96K30 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RITA1Q96K30 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RITA1Q96K30 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.22■□□□□ 0.67
RITA1Q96K30 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RITA1Q96K30 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RITA1Q96K30 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RITA1Q96K30 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RITA1Q96K30 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RITA1Q96K30 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.21■□□□□ 0.67
RITA1Q96K30 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.21■□□□□ 0.67
RITA1Q96K30 U85056.1-201ENST00000616429 682 ntBASIC19.21■□□□□ 0.67
RITA1Q96K30 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.21■□□□□ 0.67
RITA1Q96K30 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RITA1Q96K30 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RITA1Q96K30 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms