Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
NCLNQ969V3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
NCLNQ969V3 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NCLNQ969V3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.06■■□□□ 1.28
NCLNQ969V3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NCLNQ969V3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
NCLNQ969V3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
NCLNQ969V3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.05■■□□□ 1.28
NCLNQ969V3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NCLNQ969V3 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NCLNQ969V3 ECEL1P2-201ENST00000461596 1295 ntBASIC23.05■■□□□ 1.28
NCLNQ969V3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.05■■□□□ 1.28
NCLNQ969V3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NCLNQ969V3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
NCLNQ969V3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
NCLNQ969V3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.04■■□□□ 1.28
NCLNQ969V3 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
NCLNQ969V3 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
NCLNQ969V3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
NCLNQ969V3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NCLNQ969V3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NCLNQ969V3 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NCLNQ969V3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NCLNQ969V3 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NCLNQ969V3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.03■■□□□ 1.28
NCLNQ969V3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NCLNQ969V3 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.03■■□□□ 1.28
NCLNQ969V3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.03■■□□□ 1.28
NCLNQ969V3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NCLNQ969V3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NCLNQ969V3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.03■■□□□ 1.28
NCLNQ969V3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
NCLNQ969V3 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.02■■□□□ 1.28
NCLNQ969V3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
NCLNQ969V3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NCLNQ969V3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
NCLNQ969V3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.01■■□□□ 1.27
NCLNQ969V3 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
NCLNQ969V3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NCLNQ969V3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NCLNQ969V3 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NCLNQ969V3 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.01■■□□□ 1.27
NCLNQ969V3 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.01■■□□□ 1.27
NCLNQ969V3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
NCLNQ969V3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
NCLNQ969V3 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.01■■□□□ 1.27
NCLNQ969V3 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.01■■□□□ 1.27
NCLNQ969V3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23■■□□□ 1.27
NCLNQ969V3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23■■□□□ 1.27
NCLNQ969V3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
NCLNQ969V3 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23■■□□□ 1.27
NCLNQ969V3 AC093323.1-202ENST00000635031 2045 ntBASIC23■■□□□ 1.27
NCLNQ969V3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NCLNQ969V3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23■■□□□ 1.27
NCLNQ969V3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NCLNQ969V3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23■■□□□ 1.27
NCLNQ969V3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23■■□□□ 1.27
NCLNQ969V3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
NCLNQ969V3 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
NCLNQ969V3 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
NCLNQ969V3 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NCLNQ969V3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
NCLNQ969V3 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NCLNQ969V3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
NCLNQ969V3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
NCLNQ969V3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NCLNQ969V3 ABHD17AP5-201ENST00000580133 923 ntBASIC22.97■■□□□ 1.27
NCLNQ969V3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.97■■□□□ 1.27
NCLNQ969V3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.97■■□□□ 1.27
NCLNQ969V3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
NCLNQ969V3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NCLNQ969V3 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NCLNQ969V3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NCLNQ969V3 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
NCLNQ969V3 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC22.96■■□□□ 1.27
NCLNQ969V3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
NCLNQ969V3 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.96■■□□□ 1.27
NCLNQ969V3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
NCLNQ969V3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
NCLNQ969V3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.95■■□□□ 1.26
NCLNQ969V3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.95■■□□□ 1.26
NCLNQ969V3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
NCLNQ969V3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
NCLNQ969V3 ERN1-208ENST00000606895 2068 ntBASIC22.95■■□□□ 1.26
NCLNQ969V3 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.95■■□□□ 1.26
NCLNQ969V3 SMPD5-203ENST00000639008 1464 ntBASIC22.95■■□□□ 1.26
NCLNQ969V3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.94■■□□□ 1.26
NCLNQ969V3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NCLNQ969V3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.94■■□□□ 1.26
NCLNQ969V3 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.94■■□□□ 1.26
NCLNQ969V3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
NCLNQ969V3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.94■■□□□ 1.26
NCLNQ969V3 AC010501.1-201ENST00000606270 1962 ntBASIC22.94■■□□□ 1.26
NCLNQ969V3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
NCLNQ969V3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
NCLNQ969V3 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NCLNQ969V3 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NCLNQ969V3 AC025884.2-201ENST00000553429 711 ntBASIC22.93■■□□□ 1.26
NCLNQ969V3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
NCLNQ969V3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms