Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
SYNE2Q8WXH0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC10.16□□□□□ -0.78
SYNE2Q8WXH0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC10.16□□□□□ -0.78
SYNE2Q8WXH0 WHAMMP2-203ENST00000563942 1603 ntBASIC10.16□□□□□ -0.78
SYNE2Q8WXH0 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
SYNE2Q8WXH0 AC024257.2-201ENST00000549699 147 ntBASIC10.16□□□□□ -0.78
SYNE2Q8WXH0 RAP2CP1-201ENST00000605103 478 ntBASIC10.16□□□□□ -0.78
SYNE2Q8WXH0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SYNE2Q8WXH0 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SYNE2Q8WXH0 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SYNE2Q8WXH0 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
SYNE2Q8WXH0 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SYNE2Q8WXH0 RASA4CP-201ENST00000424092 1398 ntBASIC10.15□□□□□ -0.78
SYNE2Q8WXH0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SYNE2Q8WXH0 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC10.15□□□□□ -0.78
SYNE2Q8WXH0 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SYNE2Q8WXH0 AL512631.2-201ENST00000604634 923 ntBASIC10.15□□□□□ -0.78
SYNE2Q8WXH0 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SYNE2Q8WXH0 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SYNE2Q8WXH0 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
SYNE2Q8WXH0 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC10.15□□□□□ -0.78
SYNE2Q8WXH0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC10.15□□□□□ -0.78
SYNE2Q8WXH0 AC104771.1-201ENST00000603335 964 ntBASIC10.15□□□□□ -0.78
SYNE2Q8WXH0 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC10.15□□□□□ -0.79
SYNE2Q8WXH0 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC10.15□□□□□ -0.79
SYNE2Q8WXH0 CD99P1-205ENST00000527459 561 ntBASIC10.14□□□□□ -0.79
SYNE2Q8WXH0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC10.14□□□□□ -0.79
SYNE2Q8WXH0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC10.14□□□□□ -0.79
SYNE2Q8WXH0 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC10.14□□□□□ -0.79
SYNE2Q8WXH0 CA15P2-201ENST00000611168 834 ntBASIC10.14□□□□□ -0.79
SYNE2Q8WXH0 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SYNE2Q8WXH0 EDA-201ENST00000338901 1233 ntBASIC10.14□□□□□ -0.79
SYNE2Q8WXH0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC10.14□□□□□ -0.79
SYNE2Q8WXH0 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC10.13□□□□□ -0.79
SYNE2Q8WXH0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SYNE2Q8WXH0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC10.13□□□□□ -0.79
SYNE2Q8WXH0 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
SYNE2Q8WXH0 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
SYNE2Q8WXH0 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC10.13□□□□□ -0.79
SYNE2Q8WXH0 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC10.13□□□□□ -0.79
SYNE2Q8WXH0 MAG-206ENST00000597035 542 ntTSL 4 BASIC10.13□□□□□ -0.79
SYNE2Q8WXH0 AL499627.2-201ENST00000606283 725 ntBASIC10.13□□□□□ -0.79
SYNE2Q8WXH0 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SYNE2Q8WXH0 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SYNE2Q8WXH0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC10.12□□□□□ -0.79
SYNE2Q8WXH0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC10.12□□□□□ -0.79
SYNE2Q8WXH0 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
SYNE2Q8WXH0 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC10.12□□□□□ -0.79
SYNE2Q8WXH0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC10.12□□□□□ -0.79
SYNE2Q8WXH0 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SYNE2Q8WXH0 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
SYNE2Q8WXH0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SYNE2Q8WXH0 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC10.12□□□□□ -0.79
SYNE2Q8WXH0 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SYNE2Q8WXH0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC10.12□□□□□ -0.79
SYNE2Q8WXH0 AL031602.1-201ENST00000633169 911 ntBASIC10.12□□□□□ -0.79
SYNE2Q8WXH0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC10.12□□□□□ -0.79
SYNE2Q8WXH0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SYNE2Q8WXH0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
SYNE2Q8WXH0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
SYNE2Q8WXH0 AC022616.5-201ENST00000518796 181 ntBASIC10.12□□□□□ -0.79
SYNE2Q8WXH0 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
SYNE2Q8WXH0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC10.11□□□□□ -0.79
SYNE2Q8WXH0 AC135983.2-203ENST00000454486 1613 ntBASIC10.11□□□□□ -0.79
SYNE2Q8WXH0 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SYNE2Q8WXH0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SYNE2Q8WXH0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SYNE2Q8WXH0 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SYNE2Q8WXH0 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
SYNE2Q8WXH0 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC10.11□□□□□ -0.79
SYNE2Q8WXH0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
SYNE2Q8WXH0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC10.11□□□□□ -0.79
SYNE2Q8WXH0 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SYNE2Q8WXH0 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC10.1□□□□□ -0.79
SYNE2Q8WXH0 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC10.1□□□□□ -0.79
SYNE2Q8WXH0 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
SYNE2Q8WXH0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC10.1□□□□□ -0.79
SYNE2Q8WXH0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SYNE2Q8WXH0 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SYNE2Q8WXH0 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC10.1□□□□□ -0.79
SYNE2Q8WXH0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SYNE2Q8WXH0 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SYNE2Q8WXH0 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SYNE2Q8WXH0 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC10.1□□□□□ -0.79
SYNE2Q8WXH0 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SYNE2Q8WXH0 IRS3P-201ENST00000223076 1006 ntBASIC10.1□□□□□ -0.79
SYNE2Q8WXH0 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SYNE2Q8WXH0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC10.1□□□□□ -0.79
SYNE2Q8WXH0 GRAMD4P4-201ENST00000613563 1115 ntBASIC10.1□□□□□ -0.79
SYNE2Q8WXH0 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
SYNE2Q8WXH0 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC10.1□□□□□ -0.79
SYNE2Q8WXH0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SYNE2Q8WXH0 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
SYNE2Q8WXH0 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
SYNE2Q8WXH0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SYNE2Q8WXH0 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SYNE2Q8WXH0 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
SYNE2Q8WXH0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC10.09□□□□□ -0.79
SYNE2Q8WXH0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SYNE2Q8WXH0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 212.8 ms