Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC28.51■■■□□ 2.15
STAG1Q8WVM7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC28.51■■■□□ 2.15
STAG1Q8WVM7 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
STAG1Q8WVM7 DUX4L18-201ENST00000553347 1267 ntBASIC28.51■■■□□ 2.15
STAG1Q8WVM7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
STAG1Q8WVM7 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC28.5■■■□□ 2.15
STAG1Q8WVM7 AC018755.3-202ENST00000596210 929 ntBASIC28.5■■■□□ 2.15
STAG1Q8WVM7 MIR6765-201ENST00000614092 87 ntBASIC28.5■■■□□ 2.15
STAG1Q8WVM7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC28.5■■■□□ 2.15
STAG1Q8WVM7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC28.5■■■□□ 2.15
STAG1Q8WVM7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
STAG1Q8WVM7 AC091060.1-201ENST00000623524 1766 ntBASIC28.5■■■□□ 2.15
STAG1Q8WVM7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
STAG1Q8WVM7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
STAG1Q8WVM7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC28.49■■■□□ 2.15
STAG1Q8WVM7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
STAG1Q8WVM7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC28.49■■■□□ 2.15
STAG1Q8WVM7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC28.49■■■□□ 2.15
STAG1Q8WVM7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC28.49■■■□□ 2.15
STAG1Q8WVM7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC28.49■■■□□ 2.15
STAG1Q8WVM7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC28.49■■■□□ 2.15
STAG1Q8WVM7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC28.49■■■□□ 2.15
STAG1Q8WVM7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
STAG1Q8WVM7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC28.49■■■□□ 2.15
STAG1Q8WVM7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC28.48■■■□□ 2.15
STAG1Q8WVM7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC28.48■■■□□ 2.15
STAG1Q8WVM7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
STAG1Q8WVM7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
STAG1Q8WVM7 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC28.47■■■□□ 2.15
STAG1Q8WVM7 AC010501.1-201ENST00000606270 1962 ntBASIC28.47■■■□□ 2.15
STAG1Q8WVM7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC28.47■■■□□ 2.15
STAG1Q8WVM7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
STAG1Q8WVM7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
STAG1Q8WVM7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.15
STAG1Q8WVM7 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.15
STAG1Q8WVM7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
STAG1Q8WVM7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.14
STAG1Q8WVM7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.14
STAG1Q8WVM7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC28.45■■■□□ 2.14
STAG1Q8WVM7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC28.45■■■□□ 2.14
STAG1Q8WVM7 AC096887.2-201ENST00000623443 1957 ntBASIC28.44■■■□□ 2.14
STAG1Q8WVM7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
STAG1Q8WVM7 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
STAG1Q8WVM7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC28.44■■■□□ 2.14
STAG1Q8WVM7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC28.44■■■□□ 2.14
STAG1Q8WVM7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC28.44■■■□□ 2.14
STAG1Q8WVM7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC28.43■■■□□ 2.14
STAG1Q8WVM7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC28.43■■■□□ 2.14
STAG1Q8WVM7 DUSP8P4-201ENST00000399538 1761 ntBASIC28.43■■■□□ 2.14
STAG1Q8WVM7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC28.43■■■□□ 2.14
STAG1Q8WVM7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
STAG1Q8WVM7 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC28.43■■■□□ 2.14
STAG1Q8WVM7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC28.43■■■□□ 2.14
STAG1Q8WVM7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
STAG1Q8WVM7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC28.43■■■□□ 2.14
STAG1Q8WVM7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
STAG1Q8WVM7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC28.42■■■□□ 2.14
STAG1Q8WVM7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC28.42■■■□□ 2.14
STAG1Q8WVM7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC28.42■■■□□ 2.14
STAG1Q8WVM7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
STAG1Q8WVM7 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC28.41■■■□□ 2.14
STAG1Q8WVM7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC28.41■■■□□ 2.14
STAG1Q8WVM7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC28.41■■■□□ 2.14
STAG1Q8WVM7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
STAG1Q8WVM7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC28.41■■■□□ 2.14
STAG1Q8WVM7 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC28.41■■■□□ 2.14
STAG1Q8WVM7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC28.41■■■□□ 2.14
STAG1Q8WVM7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
STAG1Q8WVM7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
STAG1Q8WVM7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC28.41■■■□□ 2.14
STAG1Q8WVM7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
STAG1Q8WVM7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC28.4■■■□□ 2.14
STAG1Q8WVM7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
STAG1Q8WVM7 AC145676.1-201ENST00000514988 2004 ntBASIC28.4■■■□□ 2.14
STAG1Q8WVM7 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC28.39■■■□□ 2.14
STAG1Q8WVM7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC28.39■■■□□ 2.14
STAG1Q8WVM7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC28.39■■■□□ 2.13
STAG1Q8WVM7 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC28.38■■■□□ 2.13
STAG1Q8WVM7 KRT18P10-201ENST00000388836 1287 ntBASIC28.38■■■□□ 2.13
STAG1Q8WVM7 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC28.38■■■□□ 2.13
STAG1Q8WVM7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
STAG1Q8WVM7 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC28.38■■■□□ 2.13
STAG1Q8WVM7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC28.38■■■□□ 2.13
STAG1Q8WVM7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC28.37■■■□□ 2.13
STAG1Q8WVM7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC28.37■■■□□ 2.13
STAG1Q8WVM7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC28.36■■■□□ 2.13
STAG1Q8WVM7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC28.36■■■□□ 2.13
STAG1Q8WVM7 RPS2P7-201ENST00000447334 885 ntBASIC28.36■■■□□ 2.13
STAG1Q8WVM7 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
STAG1Q8WVM7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC28.36■■■□□ 2.13
STAG1Q8WVM7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
STAG1Q8WVM7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
STAG1Q8WVM7 AC087393.1-201ENST00000582896 145 ntBASIC28.35■■■□□ 2.13
STAG1Q8WVM7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
STAG1Q8WVM7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
STAG1Q8WVM7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
STAG1Q8WVM7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
STAG1Q8WVM7 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
STAG1Q8WVM7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC28.34■■■□□ 2.13
STAG1Q8WVM7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms