Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SPTSSBQ8NFR3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SPTSSBQ8NFR3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC13.32□□□□□ -0.28
SPTSSBQ8NFR3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC13.32□□□□□ -0.28
SPTSSBQ8NFR3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SPTSSBQ8NFR3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SPTSSBQ8NFR3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SPTSSBQ8NFR3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SPTSSBQ8NFR3 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SPTSSBQ8NFR3 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SPTSSBQ8NFR3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
SPTSSBQ8NFR3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
SPTSSBQ8NFR3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPTSSBQ8NFR3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPTSSBQ8NFR3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPTSSBQ8NFR3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPTSSBQ8NFR3 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPTSSBQ8NFR3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPTSSBQ8NFR3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SPTSSBQ8NFR3 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPTSSBQ8NFR3 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SPTSSBQ8NFR3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPTSSBQ8NFR3 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SPTSSBQ8NFR3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPTSSBQ8NFR3 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPTSSBQ8NFR3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC13.3□□□□□ -0.28
SPTSSBQ8NFR3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SPTSSBQ8NFR3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC13.3□□□□□ -0.28
SPTSSBQ8NFR3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SPTSSBQ8NFR3 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SPTSSBQ8NFR3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC13.3□□□□□ -0.28
SPTSSBQ8NFR3 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
SPTSSBQ8NFR3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SPTSSBQ8NFR3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SPTSSBQ8NFR3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SPTSSBQ8NFR3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SPTSSBQ8NFR3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SPTSSBQ8NFR3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC13.29□□□□□ -0.28
SPTSSBQ8NFR3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC13.29□□□□□ -0.28
SPTSSBQ8NFR3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SPTSSBQ8NFR3 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SPTSSBQ8NFR3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SPTSSBQ8NFR3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SPTSSBQ8NFR3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC13.29□□□□□ -0.28
SPTSSBQ8NFR3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC13.29□□□□□ -0.28
SPTSSBQ8NFR3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SPTSSBQ8NFR3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SPTSSBQ8NFR3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SPTSSBQ8NFR3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
SPTSSBQ8NFR3 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SPTSSBQ8NFR3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SPTSSBQ8NFR3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SPTSSBQ8NFR3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
SPTSSBQ8NFR3 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC13.28□□□□□ -0.28
SPTSSBQ8NFR3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SPTSSBQ8NFR3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
SPTSSBQ8NFR3 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SPTSSBQ8NFR3 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SPTSSBQ8NFR3 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC13.28□□□□□ -0.28
SPTSSBQ8NFR3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SPTSSBQ8NFR3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SPTSSBQ8NFR3 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SPTSSBQ8NFR3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SPTSSBQ8NFR3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SPTSSBQ8NFR3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SPTSSBQ8NFR3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SPTSSBQ8NFR3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SPTSSBQ8NFR3 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC13.26□□□□□ -0.29
SPTSSBQ8NFR3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC13.26□□□□□ -0.29
SPTSSBQ8NFR3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SPTSSBQ8NFR3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SPTSSBQ8NFR3 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SPTSSBQ8NFR3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SPTSSBQ8NFR3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SPTSSBQ8NFR3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SPTSSBQ8NFR3 AC090340.1-201ENST00000620778 4980 ntBASIC13.25□□□□□ -0.29
SPTSSBQ8NFR3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SPTSSBQ8NFR3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SPTSSBQ8NFR3 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
SPTSSBQ8NFR3 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
SPTSSBQ8NFR3 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SPTSSBQ8NFR3 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SPTSSBQ8NFR3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SPTSSBQ8NFR3 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SPTSSBQ8NFR3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SPTSSBQ8NFR3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SPTSSBQ8NFR3 SLC25A24-204ENST00000569674 2357 ntBASIC13.24□□□□□ -0.29
SPTSSBQ8NFR3 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPTSSBQ8NFR3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPTSSBQ8NFR3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPTSSBQ8NFR3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
SPTSSBQ8NFR3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPTSSBQ8NFR3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
SPTSSBQ8NFR3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPTSSBQ8NFR3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPTSSBQ8NFR3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPTSSBQ8NFR3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPTSSBQ8NFR3 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPTSSBQ8NFR3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SPTSSBQ8NFR3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms