Protein–RNA interactions for Protein: Q8NC56

LEMD2, LEM domain-containing protein 2, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2Q8NC56 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
LEMD2Q8NC56 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
LEMD2Q8NC56 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC25.22■■□□□ 1.63
LEMD2Q8NC56 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
LEMD2Q8NC56 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
LEMD2Q8NC56 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.22■■□□□ 1.63
LEMD2Q8NC56 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.21■■□□□ 1.63
LEMD2Q8NC56 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
LEMD2Q8NC56 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
LEMD2Q8NC56 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
LEMD2Q8NC56 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
LEMD2Q8NC56 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
LEMD2Q8NC56 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC25.2■■□□□ 1.62
LEMD2Q8NC56 AC239859.2-201ENST00000444165 318 ntBASIC25.2■■□□□ 1.62
LEMD2Q8NC56 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC25.2■■□□□ 1.62
LEMD2Q8NC56 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
LEMD2Q8NC56 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
LEMD2Q8NC56 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
LEMD2Q8NC56 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.19■■□□□ 1.62
LEMD2Q8NC56 AC131212.1-201ENST00000613771 668 ntBASIC25.19■■□□□ 1.62
LEMD2Q8NC56 KRT18P24-201ENST00000344739 1156 ntBASIC25.18■■□□□ 1.62
LEMD2Q8NC56 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
LEMD2Q8NC56 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC25.18■■□□□ 1.62
LEMD2Q8NC56 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
LEMD2Q8NC56 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
LEMD2Q8NC56 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC25.18■■□□□ 1.62
LEMD2Q8NC56 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.17■■□□□ 1.62
LEMD2Q8NC56 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
LEMD2Q8NC56 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
LEMD2Q8NC56 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
LEMD2Q8NC56 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
LEMD2Q8NC56 AL356441.2-201ENST00000443009 864 ntBASIC25.17■■□□□ 1.62
LEMD2Q8NC56 THA1P-201ENST00000590384 1145 ntBASIC25.17■■□□□ 1.62
LEMD2Q8NC56 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.17■■□□□ 1.62
LEMD2Q8NC56 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
LEMD2Q8NC56 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC25.16■■□□□ 1.62
LEMD2Q8NC56 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
LEMD2Q8NC56 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
LEMD2Q8NC56 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
LEMD2Q8NC56 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC25.15■■□□□ 1.62
LEMD2Q8NC56 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
LEMD2Q8NC56 BX664725.1-201ENST00000438252 379 ntBASIC25.15■■□□□ 1.62
LEMD2Q8NC56 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
LEMD2Q8NC56 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC25.15■■□□□ 1.62
LEMD2Q8NC56 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC25.15■■□□□ 1.62
LEMD2Q8NC56 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
LEMD2Q8NC56 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC25.15■■□□□ 1.62
LEMD2Q8NC56 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
LEMD2Q8NC56 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
LEMD2Q8NC56 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
LEMD2Q8NC56 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC25.14■■□□□ 1.62
LEMD2Q8NC56 AL592295.1-201ENST00000400984 884 ntBASIC25.14■■□□□ 1.62
LEMD2Q8NC56 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
LEMD2Q8NC56 KRT125P-201ENST00000546827 989 ntBASIC25.14■■□□□ 1.62
LEMD2Q8NC56 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC25.14■■□□□ 1.62
LEMD2Q8NC56 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
LEMD2Q8NC56 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.61
LEMD2Q8NC56 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
LEMD2Q8NC56 AP004609.3-201ENST00000610705 1884 ntBASIC25.13■■□□□ 1.61
LEMD2Q8NC56 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
LEMD2Q8NC56 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.13■■□□□ 1.61
LEMD2Q8NC56 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
LEMD2Q8NC56 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC25.13■■□□□ 1.61
LEMD2Q8NC56 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC25.13■■□□□ 1.61
LEMD2Q8NC56 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
LEMD2Q8NC56 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
LEMD2Q8NC56 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
LEMD2Q8NC56 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.11■■□□□ 1.61
LEMD2Q8NC56 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
LEMD2Q8NC56 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC25.11■■□□□ 1.61
LEMD2Q8NC56 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
LEMD2Q8NC56 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
LEMD2Q8NC56 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC25.1■■□□□ 1.61
LEMD2Q8NC56 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
LEMD2Q8NC56 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
LEMD2Q8NC56 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC25.1■■□□□ 1.61
LEMD2Q8NC56 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
LEMD2Q8NC56 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
LEMD2Q8NC56 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
LEMD2Q8NC56 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
LEMD2Q8NC56 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
LEMD2Q8NC56 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
LEMD2Q8NC56 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
LEMD2Q8NC56 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
LEMD2Q8NC56 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
LEMD2Q8NC56 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
LEMD2Q8NC56 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
LEMD2Q8NC56 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
LEMD2Q8NC56 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.08■■□□□ 1.61
LEMD2Q8NC56 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.08■■□□□ 1.61
LEMD2Q8NC56 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
LEMD2Q8NC56 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.08■■□□□ 1.6
LEMD2Q8NC56 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
LEMD2Q8NC56 CREM-229ENST00000474362 1030 ntTSL 2 BASIC25.07■■□□□ 1.6
LEMD2Q8NC56 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC25.07■■□□□ 1.6
LEMD2Q8NC56 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
LEMD2Q8NC56 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
LEMD2Q8NC56 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
LEMD2Q8NC56 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
LEMD2Q8NC56 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms