Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RAB42Q8N4Z0 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
RAB42Q8N4Z0 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
RAB42Q8N4Z0 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.37■■□□□ 1.33
RAB42Q8N4Z0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RAB42Q8N4Z0 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.36■■□□□ 1.33
RAB42Q8N4Z0 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.36■■□□□ 1.33
RAB42Q8N4Z0 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
RAB42Q8N4Z0 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RAB42Q8N4Z0 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
RAB42Q8N4Z0 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
RAB42Q8N4Z0 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RAB42Q8N4Z0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
RAB42Q8N4Z0 KRT18P60-201ENST00000312876 1297 ntBASIC23.35■■□□□ 1.33
RAB42Q8N4Z0 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC23.35■■□□□ 1.33
RAB42Q8N4Z0 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RAB42Q8N4Z0 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RAB42Q8N4Z0 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RAB42Q8N4Z0 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RAB42Q8N4Z0 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
RAB42Q8N4Z0 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.35■■□□□ 1.33
RAB42Q8N4Z0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.35■■□□□ 1.33
RAB42Q8N4Z0 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
RAB42Q8N4Z0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
RAB42Q8N4Z0 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RAB42Q8N4Z0 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RAB42Q8N4Z0 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RAB42Q8N4Z0 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
RAB42Q8N4Z0 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RAB42Q8N4Z0 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.33■■□□□ 1.33
RAB42Q8N4Z0 AC010501.1-201ENST00000606270 1962 ntBASIC23.33■■□□□ 1.33
RAB42Q8N4Z0 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RAB42Q8N4Z0 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RAB42Q8N4Z0 AC145676.1-201ENST00000514988 2004 ntBASIC23.33■■□□□ 1.32
RAB42Q8N4Z0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
RAB42Q8N4Z0 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
RAB42Q8N4Z0 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
RAB42Q8N4Z0 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
RAB42Q8N4Z0 MIR6765-201ENST00000614092 87 ntBASIC23.32■■□□□ 1.32
RAB42Q8N4Z0 AC129492.7-201ENST00000622992 756 ntBASIC23.32■■□□□ 1.32
RAB42Q8N4Z0 AC091060.1-201ENST00000623524 1766 ntBASIC23.32■■□□□ 1.32
RAB42Q8N4Z0 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RAB42Q8N4Z0 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.31■■□□□ 1.32
RAB42Q8N4Z0 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RAB42Q8N4Z0 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RAB42Q8N4Z0 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RAB42Q8N4Z0 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RAB42Q8N4Z0 AC012354.3-201ENST00000623734 483 ntBASIC23.3■■□□□ 1.32
RAB42Q8N4Z0 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
RAB42Q8N4Z0 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RAB42Q8N4Z0 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RAB42Q8N4Z0 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RAB42Q8N4Z0 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC23.29■■□□□ 1.32
RAB42Q8N4Z0 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.29■■□□□ 1.32
RAB42Q8N4Z0 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RAB42Q8N4Z0 DUSP8P4-201ENST00000399538 1761 ntBASIC23.29■■□□□ 1.32
RAB42Q8N4Z0 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RAB42Q8N4Z0 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.29■■□□□ 1.32
RAB42Q8N4Z0 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RAB42Q8N4Z0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RAB42Q8N4Z0 DUX4L9-201ENST00000449051 1259 ntBASIC23.28■■□□□ 1.32
RAB42Q8N4Z0 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.28■■□□□ 1.32
RAB42Q8N4Z0 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
RAB42Q8N4Z0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.27■■□□□ 1.32
RAB42Q8N4Z0 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RAB42Q8N4Z0 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.27■■□□□ 1.32
RAB42Q8N4Z0 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.27■■□□□ 1.32
RAB42Q8N4Z0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RAB42Q8N4Z0 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.27■■□□□ 1.32
RAB42Q8N4Z0 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.27■■□□□ 1.32
RAB42Q8N4Z0 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.27■■□□□ 1.32
RAB42Q8N4Z0 ERN1-208ENST00000606895 2068 ntBASIC23.27■■□□□ 1.32
RAB42Q8N4Z0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.27■■□□□ 1.32
RAB42Q8N4Z0 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
RAB42Q8N4Z0 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.27■■□□□ 1.32
RAB42Q8N4Z0 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.31
RAB42Q8N4Z0 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RAB42Q8N4Z0 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RAB42Q8N4Z0 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RAB42Q8N4Z0 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
RAB42Q8N4Z0 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.26■■□□□ 1.31
RAB42Q8N4Z0 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
RAB42Q8N4Z0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RAB42Q8N4Z0 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.25■■□□□ 1.31
RAB42Q8N4Z0 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
RAB42Q8N4Z0 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RAB42Q8N4Z0 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RAB42Q8N4Z0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
RAB42Q8N4Z0 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
RAB42Q8N4Z0 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
RAB42Q8N4Z0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RAB42Q8N4Z0 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
RAB42Q8N4Z0 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RAB42Q8N4Z0 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RAB42Q8N4Z0 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.24■■□□□ 1.31
RAB42Q8N4Z0 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
RAB42Q8N4Z0 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
RAB42Q8N4Z0 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RAB42Q8N4Z0 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RAB42Q8N4Z0 TSPY13P-201ENST00000338964 914 ntBASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms