Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS13BQ7Z7G8 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS13BQ7Z7G8 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
VPS13BQ7Z7G8 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS13BQ7Z7G8 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
VPS13BQ7Z7G8 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS13BQ7Z7G8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC15.08■□□□□ 0.01
VPS13BQ7Z7G8 LONRF2P2-201ENST00000439212 571 ntBASIC15.08■□□□□ 0.01
VPS13BQ7Z7G8 RPS2P7-201ENST00000447334 885 ntBASIC15.08■□□□□ 0.01
VPS13BQ7Z7G8 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC15.08■□□□□ 0.01
VPS13BQ7Z7G8 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
VPS13BQ7Z7G8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC15.08■□□□□ 0
VPS13BQ7Z7G8 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
VPS13BQ7Z7G8 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
VPS13BQ7Z7G8 LINC01003-201ENST00000564834 1764 ntBASIC15.08■□□□□ 0
VPS13BQ7Z7G8 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
VPS13BQ7Z7G8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC15.08■□□□□ 0
VPS13BQ7Z7G8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
VPS13BQ7Z7G8 AL136116.3-201ENST00000402907 1138 ntBASIC15.08■□□□□ 0
VPS13BQ7Z7G8 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC15.08■□□□□ 0
VPS13BQ7Z7G8 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
VPS13BQ7Z7G8 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
VPS13BQ7Z7G8 ZNRF2P3-201ENST00000424200 374 ntBASIC15.07■□□□□ 0
VPS13BQ7Z7G8 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC15.07■□□□□ 0
VPS13BQ7Z7G8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC15.07■□□□□ 0
VPS13BQ7Z7G8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
VPS13BQ7Z7G8 DRD5P2-201ENST00000421395 2012 ntBASIC15.06■□□□□ 0
VPS13BQ7Z7G8 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC15.06■□□□□ 0
VPS13BQ7Z7G8 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC15.06■□□□□ 0
VPS13BQ7Z7G8 AL512631.2-201ENST00000604634 923 ntBASIC15.06■□□□□ 0
VPS13BQ7Z7G8 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VPS13BQ7Z7G8 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC15.06■□□□□ 0
VPS13BQ7Z7G8 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC15.06■□□□□ 0
VPS13BQ7Z7G8 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC15.06■□□□□ 0
VPS13BQ7Z7G8 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
VPS13BQ7Z7G8 MIR4466-201ENST00000606121 54 ntBASIC15.06■□□□□ 0
VPS13BQ7Z7G8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC15.06■□□□□ 0
VPS13BQ7Z7G8 AC092666.2-201ENST00000613287 246 ntBASIC15.06■□□□□ 0
VPS13BQ7Z7G8 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
VPS13BQ7Z7G8 AC026271.2-201ENST00000428091 497 ntBASIC15.05■□□□□ -0
VPS13BQ7Z7G8 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VPS13BQ7Z7G8 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
VPS13BQ7Z7G8 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC15.04■□□□□ -0
VPS13BQ7Z7G8 BX255925.1-201ENST00000566954 1854 ntBASIC15.04■□□□□ -0
VPS13BQ7Z7G8 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VPS13BQ7Z7G8 EBPL-204ENST00000378272 766 ntTSL 3 BASIC15.04■□□□□ -0
VPS13BQ7Z7G8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC15.04■□□□□ -0
VPS13BQ7Z7G8 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VPS13BQ7Z7G8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC15.04■□□□□ -0
VPS13BQ7Z7G8 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC15.04■□□□□ -0
VPS13BQ7Z7G8 AC096631.2-201ENST00000436136 790 ntBASIC15.04■□□□□ -0
VPS13BQ7Z7G8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC15.04■□□□□ -0
VPS13BQ7Z7G8 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC15.04■□□□□ -0
VPS13BQ7Z7G8 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VPS13BQ7Z7G8 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VPS13BQ7Z7G8 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC15.04■□□□□ -0
VPS13BQ7Z7G8 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC15.04■□□□□ -0
VPS13BQ7Z7G8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC15.03■□□□□ -0
VPS13BQ7Z7G8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS13BQ7Z7G8 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
VPS13BQ7Z7G8 AC135279.3-201ENST00000610945 1311 ntBASIC15.03■□□□□ -0
VPS13BQ7Z7G8 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS13BQ7Z7G8 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS13BQ7Z7G8 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS13BQ7Z7G8 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC15.03■□□□□ -0
VPS13BQ7Z7G8 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC15.03■□□□□ -0
VPS13BQ7Z7G8 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC15.03■□□□□ -0
VPS13BQ7Z7G8 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
VPS13BQ7Z7G8 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
VPS13BQ7Z7G8 SRR-208ENST00000576848 588 ntTSL 4 BASIC15.03■□□□□ -0
VPS13BQ7Z7G8 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS13BQ7Z7G8 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
VPS13BQ7Z7G8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC15.02■□□□□ -0
VPS13BQ7Z7G8 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VPS13BQ7Z7G8 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC15.02■□□□□ -0
VPS13BQ7Z7G8 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
VPS13BQ7Z7G8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC15.02■□□□□ -0
VPS13BQ7Z7G8 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
VPS13BQ7Z7G8 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC15.02□□□□□ -0.01
VPS13BQ7Z7G8 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC15.02□□□□□ -0.01
VPS13BQ7Z7G8 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
VPS13BQ7Z7G8 AC133561.4-201ENST00000566112 224 ntBASIC15.01□□□□□ -0.01
VPS13BQ7Z7G8 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS13BQ7Z7G8 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC15.01□□□□□ -0.01
VPS13BQ7Z7G8 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC15.01□□□□□ -0.01
VPS13BQ7Z7G8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC15.01□□□□□ -0.01
VPS13BQ7Z7G8 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC15.01□□□□□ -0.01
VPS13BQ7Z7G8 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC15.01□□□□□ -0.01
VPS13BQ7Z7G8 BX664725.1-201ENST00000438252 379 ntBASIC15.01□□□□□ -0.01
VPS13BQ7Z7G8 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC15.01□□□□□ -0.01
VPS13BQ7Z7G8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VPS13BQ7Z7G8 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VPS13BQ7Z7G8 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC15.01□□□□□ -0.01
VPS13BQ7Z7G8 AC137630.3-201ENST00000607245 391 ntBASIC15.01□□□□□ -0.01
VPS13BQ7Z7G8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
VPS13BQ7Z7G8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
VPS13BQ7Z7G8 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
VPS13BQ7Z7G8 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC15□□□□□ -0.01
VPS13BQ7Z7G8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC15□□□□□ -0.01
VPS13BQ7Z7G8 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms