Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM53Q6P2H8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM53Q6P2H8 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.73■■□□□ 1.07
TMEM53Q6P2H8 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM53Q6P2H8 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM53Q6P2H8 AC126177.7-201ENST00000547904 679 ntBASIC21.73■■□□□ 1.07
TMEM53Q6P2H8 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.73■■□□□ 1.07
TMEM53Q6P2H8 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
TMEM53Q6P2H8 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.73■■□□□ 1.07
TMEM53Q6P2H8 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.73■■□□□ 1.07
TMEM53Q6P2H8 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
TMEM53Q6P2H8 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.72■■□□□ 1.07
TMEM53Q6P2H8 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM53Q6P2H8 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM53Q6P2H8 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.72■■□□□ 1.07
TMEM53Q6P2H8 MIR4449-201ENST00000578365 66 ntBASIC21.72■■□□□ 1.07
TMEM53Q6P2H8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM53Q6P2H8 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM53Q6P2H8 WHAMMP3-201ENST00000611636 1609 ntBASIC21.72■■□□□ 1.07
TMEM53Q6P2H8 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
TMEM53Q6P2H8 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM53Q6P2H8 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
TMEM53Q6P2H8 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
TMEM53Q6P2H8 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.71■■□□□ 1.07
TMEM53Q6P2H8 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM53Q6P2H8 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TMEM53Q6P2H8 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
TMEM53Q6P2H8 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
TMEM53Q6P2H8 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
TMEM53Q6P2H8 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMEM53Q6P2H8 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMEM53Q6P2H8 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
TMEM53Q6P2H8 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM53Q6P2H8 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
TMEM53Q6P2H8 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM53Q6P2H8 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.69■■□□□ 1.06
TMEM53Q6P2H8 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM53Q6P2H8 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM53Q6P2H8 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.69■■□□□ 1.06
TMEM53Q6P2H8 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM53Q6P2H8 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM53Q6P2H8 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
TMEM53Q6P2H8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TMEM53Q6P2H8 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TMEM53Q6P2H8 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
TMEM53Q6P2H8 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TMEM53Q6P2H8 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TMEM53Q6P2H8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TMEM53Q6P2H8 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
TMEM53Q6P2H8 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TMEM53Q6P2H8 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TMEM53Q6P2H8 AC068473.5-201ENST00000616428 2072 ntBASIC21.65■■□□□ 1.06
TMEM53Q6P2H8 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TMEM53Q6P2H8 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.65■■□□□ 1.06
TMEM53Q6P2H8 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TMEM53Q6P2H8 AL359258.2-201ENST00000564063 1566 ntBASIC21.65■■□□□ 1.06
TMEM53Q6P2H8 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TMEM53Q6P2H8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.65■■□□□ 1.06
TMEM53Q6P2H8 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.06
TMEM53Q6P2H8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.06
TMEM53Q6P2H8 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
TMEM53Q6P2H8 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TMEM53Q6P2H8 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TMEM53Q6P2H8 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.64■■□□□ 1.05
TMEM53Q6P2H8 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TMEM53Q6P2H8 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TMEM53Q6P2H8 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TMEM53Q6P2H8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.64■■□□□ 1.05
TMEM53Q6P2H8 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TMEM53Q6P2H8 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TMEM53Q6P2H8 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.63■■□□□ 1.05
TMEM53Q6P2H8 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TMEM53Q6P2H8 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
TMEM53Q6P2H8 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TMEM53Q6P2H8 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TMEM53Q6P2H8 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TMEM53Q6P2H8 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TMEM53Q6P2H8 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
TMEM53Q6P2H8 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.61■■□□□ 1.05
TMEM53Q6P2H8 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TMEM53Q6P2H8 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.61■■□□□ 1.05
TMEM53Q6P2H8 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
TMEM53Q6P2H8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
TMEM53Q6P2H8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.61■■□□□ 1.05
TMEM53Q6P2H8 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
TMEM53Q6P2H8 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TMEM53Q6P2H8 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TMEM53Q6P2H8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
TMEM53Q6P2H8 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.6■■□□□ 1.05
TMEM53Q6P2H8 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.6■■□□□ 1.05
TMEM53Q6P2H8 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.6■■□□□ 1.05
TMEM53Q6P2H8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TMEM53Q6P2H8 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.6■■□□□ 1.05
TMEM53Q6P2H8 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.6■■□□□ 1.05
TMEM53Q6P2H8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.6■■□□□ 1.05
TMEM53Q6P2H8 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TMEM53Q6P2H8 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TMEM53Q6P2H8 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TMEM53Q6P2H8 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TMEM53Q6P2H8 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms