Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATPAF1Q5TC12 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ATPAF1Q5TC12 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATPAF1Q5TC12 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATPAF1Q5TC12 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATPAF1Q5TC12 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.67■□□□□ 0.9
ATPAF1Q5TC12 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATPAF1Q5TC12 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.67■□□□□ 0.9
ATPAF1Q5TC12 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATPAF1Q5TC12 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATPAF1Q5TC12 AC060814.1-201ENST00000554326 538 ntBASIC20.66■□□□□ 0.9
ATPAF1Q5TC12 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.66■□□□□ 0.9
ATPAF1Q5TC12 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ATPAF1Q5TC12 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATPAF1Q5TC12 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
ATPAF1Q5TC12 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
ATPAF1Q5TC12 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.65■□□□□ 0.9
ATPAF1Q5TC12 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATPAF1Q5TC12 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATPAF1Q5TC12 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATPAF1Q5TC12 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ATPAF1Q5TC12 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
ATPAF1Q5TC12 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ATPAF1Q5TC12 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATPAF1Q5TC12 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATPAF1Q5TC12 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
ATPAF1Q5TC12 AC022413.1-201ENST00000624602 984 ntBASIC20.64■□□□□ 0.89
ATPAF1Q5TC12 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
ATPAF1Q5TC12 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATPAF1Q5TC12 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATPAF1Q5TC12 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATPAF1Q5TC12 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATPAF1Q5TC12 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.63■□□□□ 0.89
ATPAF1Q5TC12 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.63■□□□□ 0.89
ATPAF1Q5TC12 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATPAF1Q5TC12 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATPAF1Q5TC12 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATPAF1Q5TC12 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATPAF1Q5TC12 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.63■□□□□ 0.89
ATPAF1Q5TC12 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATPAF1Q5TC12 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATPAF1Q5TC12 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATPAF1Q5TC12 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATPAF1Q5TC12 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
ATPAF1Q5TC12 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.62■□□□□ 0.89
ATPAF1Q5TC12 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATPAF1Q5TC12 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.62■□□□□ 0.89
ATPAF1Q5TC12 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATPAF1Q5TC12 AC142381.3-201ENST00000568208 1670 ntBASIC20.61■□□□□ 0.89
ATPAF1Q5TC12 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
ATPAF1Q5TC12 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATPAF1Q5TC12 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATPAF1Q5TC12 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.61■□□□□ 0.89
ATPAF1Q5TC12 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.61■□□□□ 0.89
ATPAF1Q5TC12 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.61■□□□□ 0.89
ATPAF1Q5TC12 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATPAF1Q5TC12 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATPAF1Q5TC12 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATPAF1Q5TC12 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
ATPAF1Q5TC12 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATPAF1Q5TC12 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATPAF1Q5TC12 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.6■□□□□ 0.89
ATPAF1Q5TC12 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATPAF1Q5TC12 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATPAF1Q5TC12 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.6■□□□□ 0.89
ATPAF1Q5TC12 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ATPAF1Q5TC12 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATPAF1Q5TC12 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATPAF1Q5TC12 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ATPAF1Q5TC12 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATPAF1Q5TC12 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATPAF1Q5TC12 AC142472.1-201ENST00000612013 1741 ntBASIC20.59■□□□□ 0.89
ATPAF1Q5TC12 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATPAF1Q5TC12 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATPAF1Q5TC12 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.59■□□□□ 0.89
ATPAF1Q5TC12 GPX1-201ENST00000419349 1106 ntBASIC20.59■□□□□ 0.89
ATPAF1Q5TC12 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATPAF1Q5TC12 AC092296.2-201ENST00000589470 999 ntBASIC20.59■□□□□ 0.89
ATPAF1Q5TC12 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATPAF1Q5TC12 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATPAF1Q5TC12 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ATPAF1Q5TC12 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATPAF1Q5TC12 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.59■□□□□ 0.89
ATPAF1Q5TC12 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.59■□□□□ 0.89
ATPAF1Q5TC12 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATPAF1Q5TC12 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATPAF1Q5TC12 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATPAF1Q5TC12 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.58■□□□□ 0.89
ATPAF1Q5TC12 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATPAF1Q5TC12 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.57■□□□□ 0.88
ATPAF1Q5TC12 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATPAF1Q5TC12 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.57■□□□□ 0.88
ATPAF1Q5TC12 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATPAF1Q5TC12 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATPAF1Q5TC12 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
ATPAF1Q5TC12 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATPAF1Q5TC12 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.57■□□□□ 0.88
ATPAF1Q5TC12 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATPAF1Q5TC12 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATPAF1Q5TC12 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms