Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBR4Q5T4S7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UBR4Q5T4S7 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.64□□□□□ -0.23
UBR4Q5T4S7 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBR4Q5T4S7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
UBR4Q5T4S7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBR4Q5T4S7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBR4Q5T4S7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UBR4Q5T4S7 AC022616.5-201ENST00000518796 181 ntBASIC13.64□□□□□ -0.23
UBR4Q5T4S7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC13.64□□□□□ -0.23
UBR4Q5T4S7 AC004911.1-201ENST00000416316 871 ntBASIC13.63□□□□□ -0.23
UBR4Q5T4S7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBR4Q5T4S7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBR4Q5T4S7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBR4Q5T4S7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
UBR4Q5T4S7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBR4Q5T4S7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
UBR4Q5T4S7 AL356740.2-201ENST00000601559 647 ntBASIC13.62□□□□□ -0.23
UBR4Q5T4S7 AL136162.1-201ENST00000607711 1078 ntBASIC13.62□□□□□ -0.23
UBR4Q5T4S7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBR4Q5T4S7 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBR4Q5T4S7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC13.62□□□□□ -0.23
UBR4Q5T4S7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC13.62□□□□□ -0.23
UBR4Q5T4S7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC13.62□□□□□ -0.23
UBR4Q5T4S7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBR4Q5T4S7 AP001330.3-201ENST00000520123 633 ntBASIC13.62□□□□□ -0.23
UBR4Q5T4S7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC13.62□□□□□ -0.23
UBR4Q5T4S7 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBR4Q5T4S7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC13.62□□□□□ -0.23
UBR4Q5T4S7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBR4Q5T4S7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC13.61□□□□□ -0.23
UBR4Q5T4S7 AF213884.3-201ENST00000563833 479 ntBASIC13.61□□□□□ -0.23
UBR4Q5T4S7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC13.61□□□□□ -0.23
UBR4Q5T4S7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC13.61□□□□□ -0.23
UBR4Q5T4S7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBR4Q5T4S7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
UBR4Q5T4S7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBR4Q5T4S7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBR4Q5T4S7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
UBR4Q5T4S7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBR4Q5T4S7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC13.6□□□□□ -0.23
UBR4Q5T4S7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC13.6□□□□□ -0.23
UBR4Q5T4S7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBR4Q5T4S7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
UBR4Q5T4S7 AP002414.2-202ENST00000590929 1450 ntBASIC13.6□□□□□ -0.23
UBR4Q5T4S7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC13.6□□□□□ -0.23
UBR4Q5T4S7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC13.6□□□□□ -0.23
UBR4Q5T4S7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBR4Q5T4S7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
UBR4Q5T4S7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC13.59□□□□□ -0.23
UBR4Q5T4S7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBR4Q5T4S7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UBR4Q5T4S7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC13.59□□□□□ -0.23
UBR4Q5T4S7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBR4Q5T4S7 KRT18P5-201ENST00000436075 1291 ntBASIC13.59□□□□□ -0.23
UBR4Q5T4S7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC13.59□□□□□ -0.23
UBR4Q5T4S7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC13.59□□□□□ -0.23
UBR4Q5T4S7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UBR4Q5T4S7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
UBR4Q5T4S7 AC034268.1-201ENST00000441047 882 ntBASIC13.59□□□□□ -0.23
UBR4Q5T4S7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UBR4Q5T4S7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UBR4Q5T4S7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
UBR4Q5T4S7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC13.58□□□□□ -0.24
UBR4Q5T4S7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
UBR4Q5T4S7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
UBR4Q5T4S7 CA15P2-201ENST00000611168 834 ntBASIC13.58□□□□□ -0.24
UBR4Q5T4S7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UBR4Q5T4S7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBR4Q5T4S7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UBR4Q5T4S7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC13.57□□□□□ -0.24
UBR4Q5T4S7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC13.57□□□□□ -0.24
UBR4Q5T4S7 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBR4Q5T4S7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC13.57□□□□□ -0.24
UBR4Q5T4S7 DET1-205ENST00000558413 583 ntTSL 4 BASIC13.57□□□□□ -0.24
UBR4Q5T4S7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBR4Q5T4S7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBR4Q5T4S7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBR4Q5T4S7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC13.57□□□□□ -0.24
UBR4Q5T4S7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
UBR4Q5T4S7 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBR4Q5T4S7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
UBR4Q5T4S7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC13.56□□□□□ -0.24
UBR4Q5T4S7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
UBR4Q5T4S7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC13.56□□□□□ -0.24
UBR4Q5T4S7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
UBR4Q5T4S7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
UBR4Q5T4S7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC13.56□□□□□ -0.24
UBR4Q5T4S7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBR4Q5T4S7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBR4Q5T4S7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC13.55□□□□□ -0.24
UBR4Q5T4S7 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBR4Q5T4S7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
UBR4Q5T4S7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBR4Q5T4S7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC13.55□□□□□ -0.24
UBR4Q5T4S7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBR4Q5T4S7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBR4Q5T4S7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBR4Q5T4S7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UBR4Q5T4S7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 191.2 ms