Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
SGO1Q5FBB7 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SGO1Q5FBB7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SGO1Q5FBB7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SGO1Q5FBB7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
SGO1Q5FBB7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SGO1Q5FBB7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SGO1Q5FBB7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
SGO1Q5FBB7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.23■■□□□ 1.31
SGO1Q5FBB7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.23■■□□□ 1.31
SGO1Q5FBB7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.23■■□□□ 1.31
SGO1Q5FBB7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SGO1Q5FBB7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
SGO1Q5FBB7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.23■■□□□ 1.31
SGO1Q5FBB7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.23■■□□□ 1.31
SGO1Q5FBB7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.23■■□□□ 1.31
SGO1Q5FBB7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SGO1Q5FBB7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SGO1Q5FBB7 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.22■■□□□ 1.31
SGO1Q5FBB7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SGO1Q5FBB7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.22■■□□□ 1.31
SGO1Q5FBB7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SGO1Q5FBB7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SGO1Q5FBB7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SGO1Q5FBB7 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
SGO1Q5FBB7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SGO1Q5FBB7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SGO1Q5FBB7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
SGO1Q5FBB7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.2■■□□□ 1.3
SGO1Q5FBB7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SGO1Q5FBB7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SGO1Q5FBB7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SGO1Q5FBB7 AC022413.1-201ENST00000624602 984 ntBASIC23.2■■□□□ 1.3
SGO1Q5FBB7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SGO1Q5FBB7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.19■■□□□ 1.3
SGO1Q5FBB7 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SGO1Q5FBB7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SGO1Q5FBB7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
SGO1Q5FBB7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.19■■□□□ 1.3
SGO1Q5FBB7 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SGO1Q5FBB7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.19■■□□□ 1.3
SGO1Q5FBB7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SGO1Q5FBB7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
SGO1Q5FBB7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
SGO1Q5FBB7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SGO1Q5FBB7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SGO1Q5FBB7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
SGO1Q5FBB7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.18■■□□□ 1.3
SGO1Q5FBB7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.18■■□□□ 1.3
SGO1Q5FBB7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
SGO1Q5FBB7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.18■■□□□ 1.3
SGO1Q5FBB7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SGO1Q5FBB7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
SGO1Q5FBB7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.18■■□□□ 1.3
SGO1Q5FBB7 SMPD5-203ENST00000639008 1464 ntBASIC23.17■■□□□ 1.3
SGO1Q5FBB7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
SGO1Q5FBB7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SGO1Q5FBB7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
SGO1Q5FBB7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SGO1Q5FBB7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SGO1Q5FBB7 AC025884.2-201ENST00000553429 711 ntBASIC23.16■■□□□ 1.3
SGO1Q5FBB7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SGO1Q5FBB7 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SGO1Q5FBB7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.15■■□□□ 1.3
SGO1Q5FBB7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.15■■□□□ 1.3
SGO1Q5FBB7 AC092296.2-201ENST00000589470 999 ntBASIC23.15■■□□□ 1.3
SGO1Q5FBB7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SGO1Q5FBB7 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SGO1Q5FBB7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SGO1Q5FBB7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SGO1Q5FBB7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SGO1Q5FBB7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SGO1Q5FBB7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SGO1Q5FBB7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.14■■□□□ 1.29
SGO1Q5FBB7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.14■■□□□ 1.29
SGO1Q5FBB7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
SGO1Q5FBB7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
SGO1Q5FBB7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.14■■□□□ 1.29
SGO1Q5FBB7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.13■■□□□ 1.29
SGO1Q5FBB7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SGO1Q5FBB7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.13■■□□□ 1.29
SGO1Q5FBB7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.13■■□□□ 1.29
SGO1Q5FBB7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
SGO1Q5FBB7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
SGO1Q5FBB7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SGO1Q5FBB7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.12■■□□□ 1.29
SGO1Q5FBB7 MIR3960-201ENST00000583311 91 ntBASIC23.12■■□□□ 1.29
SGO1Q5FBB7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SGO1Q5FBB7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SGO1Q5FBB7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SGO1Q5FBB7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.12■■□□□ 1.29
SGO1Q5FBB7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SGO1Q5FBB7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
SGO1Q5FBB7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SGO1Q5FBB7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SGO1Q5FBB7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
SGO1Q5FBB7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
SGO1Q5FBB7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SGO1Q5FBB7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SGO1Q5FBB7 AC022211.4-201ENST00000625094 2161 ntBASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms