Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
SGO1Q5FBB7 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SGO1Q5FBB7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SGO1Q5FBB7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SGO1Q5FBB7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
SGO1Q5FBB7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SGO1Q5FBB7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SGO1Q5FBB7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
SGO1Q5FBB7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.23■■□□□ 1.31
SGO1Q5FBB7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.23■■□□□ 1.31
SGO1Q5FBB7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.23■■□□□ 1.31
SGO1Q5FBB7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SGO1Q5FBB7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
SGO1Q5FBB7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.23■■□□□ 1.31
SGO1Q5FBB7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.23■■□□□ 1.31
SGO1Q5FBB7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.23■■□□□ 1.31
SGO1Q5FBB7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SGO1Q5FBB7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SGO1Q5FBB7 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.22■■□□□ 1.31
SGO1Q5FBB7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SGO1Q5FBB7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.22■■□□□ 1.31
SGO1Q5FBB7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SGO1Q5FBB7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SGO1Q5FBB7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SGO1Q5FBB7 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
SGO1Q5FBB7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SGO1Q5FBB7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SGO1Q5FBB7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
SGO1Q5FBB7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.2■■□□□ 1.3
SGO1Q5FBB7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SGO1Q5FBB7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SGO1Q5FBB7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SGO1Q5FBB7 AC022413.1-201ENST00000624602 984 ntBASIC23.2■■□□□ 1.3
SGO1Q5FBB7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SGO1Q5FBB7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.19■■□□□ 1.3
SGO1Q5FBB7 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SGO1Q5FBB7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SGO1Q5FBB7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
SGO1Q5FBB7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.19■■□□□ 1.3
SGO1Q5FBB7 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SGO1Q5FBB7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.19■■□□□ 1.3
SGO1Q5FBB7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SGO1Q5FBB7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
SGO1Q5FBB7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
SGO1Q5FBB7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SGO1Q5FBB7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SGO1Q5FBB7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
SGO1Q5FBB7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.18■■□□□ 1.3
SGO1Q5FBB7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.18■■□□□ 1.3
SGO1Q5FBB7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
SGO1Q5FBB7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.18■■□□□ 1.3
SGO1Q5FBB7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SGO1Q5FBB7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
SGO1Q5FBB7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.18■■□□□ 1.3
SGO1Q5FBB7 SMPD5-203ENST00000639008 1464 ntBASIC23.17■■□□□ 1.3
SGO1Q5FBB7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
SGO1Q5FBB7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SGO1Q5FBB7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
SGO1Q5FBB7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SGO1Q5FBB7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SGO1Q5FBB7 AC025884.2-201ENST00000553429 711 ntBASIC23.16■■□□□ 1.3
SGO1Q5FBB7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SGO1Q5FBB7 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SGO1Q5FBB7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.15■■□□□ 1.3
SGO1Q5FBB7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.15■■□□□ 1.3
SGO1Q5FBB7 AC092296.2-201ENST00000589470 999 ntBASIC23.15■■□□□ 1.3
SGO1Q5FBB7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SGO1Q5FBB7 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SGO1Q5FBB7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SGO1Q5FBB7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SGO1Q5FBB7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SGO1Q5FBB7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SGO1Q5FBB7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SGO1Q5FBB7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.14■■□□□ 1.29
SGO1Q5FBB7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.14■■□□□ 1.29
SGO1Q5FBB7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
SGO1Q5FBB7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
SGO1Q5FBB7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.14■■□□□ 1.29
SGO1Q5FBB7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.13■■□□□ 1.29
SGO1Q5FBB7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SGO1Q5FBB7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.13■■□□□ 1.29
SGO1Q5FBB7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.13■■□□□ 1.29
SGO1Q5FBB7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
SGO1Q5FBB7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
SGO1Q5FBB7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SGO1Q5FBB7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.12■■□□□ 1.29
SGO1Q5FBB7 MIR3960-201ENST00000583311 91 ntBASIC23.12■■□□□ 1.29
SGO1Q5FBB7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SGO1Q5FBB7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SGO1Q5FBB7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SGO1Q5FBB7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.12■■□□□ 1.29
SGO1Q5FBB7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SGO1Q5FBB7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
SGO1Q5FBB7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SGO1Q5FBB7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SGO1Q5FBB7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
SGO1Q5FBB7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
SGO1Q5FBB7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SGO1Q5FBB7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SGO1Q5FBB7 AC022211.4-201ENST00000625094 2161 ntBASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms