Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHRFAM7AQ494W8 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHRFAM7AQ494W8 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHRFAM7AQ494W8 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHRFAM7AQ494W8 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CHRFAM7AQ494W8 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CHRFAM7AQ494W8 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHRFAM7AQ494W8 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CHRFAM7AQ494W8 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHRFAM7AQ494W8 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHRFAM7AQ494W8 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.77■□□□□ 0.92
CHRFAM7AQ494W8 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.77■□□□□ 0.91
CHRFAM7AQ494W8 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
CHRFAM7AQ494W8 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.77■□□□□ 0.91
CHRFAM7AQ494W8 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHRFAM7AQ494W8 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
CHRFAM7AQ494W8 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.76■□□□□ 0.91
CHRFAM7AQ494W8 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.76■□□□□ 0.91
CHRFAM7AQ494W8 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHRFAM7AQ494W8 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHRFAM7AQ494W8 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHRFAM7AQ494W8 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.75■□□□□ 0.91
CHRFAM7AQ494W8 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHRFAM7AQ494W8 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.75■□□□□ 0.91
CHRFAM7AQ494W8 AC129492.7-201ENST00000622992 756 ntBASIC20.75■□□□□ 0.91
CHRFAM7AQ494W8 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHRFAM7AQ494W8 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.75■□□□□ 0.91
CHRFAM7AQ494W8 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CHRFAM7AQ494W8 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CHRFAM7AQ494W8 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHRFAM7AQ494W8 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.74■□□□□ 0.91
CHRFAM7AQ494W8 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHRFAM7AQ494W8 DUX4L18-201ENST00000553347 1267 ntBASIC20.74■□□□□ 0.91
CHRFAM7AQ494W8 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHRFAM7AQ494W8 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHRFAM7AQ494W8 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHRFAM7AQ494W8 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHRFAM7AQ494W8 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHRFAM7AQ494W8 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CHRFAM7AQ494W8 AC019069.1-201ENST00000610008 1333 ntBASIC20.73■□□□□ 0.91
CHRFAM7AQ494W8 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHRFAM7AQ494W8 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHRFAM7AQ494W8 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHRFAM7AQ494W8 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHRFAM7AQ494W8 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.72■□□□□ 0.91
CHRFAM7AQ494W8 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
CHRFAM7AQ494W8 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHRFAM7AQ494W8 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHRFAM7AQ494W8 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.72■□□□□ 0.91
CHRFAM7AQ494W8 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHRFAM7AQ494W8 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.71■□□□□ 0.91
CHRFAM7AQ494W8 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHRFAM7AQ494W8 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CHRFAM7AQ494W8 AC142472.1-201ENST00000612013 1741 ntBASIC20.71■□□□□ 0.91
CHRFAM7AQ494W8 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHRFAM7AQ494W8 AL451085.2-201ENST00000605085 799 ntBASIC20.71■□□□□ 0.91
CHRFAM7AQ494W8 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHRFAM7AQ494W8 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHRFAM7AQ494W8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CHRFAM7AQ494W8 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHRFAM7AQ494W8 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHRFAM7AQ494W8 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.91
CHRFAM7AQ494W8 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CHRFAM7AQ494W8 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHRFAM7AQ494W8 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHRFAM7AQ494W8 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
CHRFAM7AQ494W8 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CHRFAM7AQ494W8 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHRFAM7AQ494W8 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
CHRFAM7AQ494W8 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHRFAM7AQ494W8 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.69■□□□□ 0.9
CHRFAM7AQ494W8 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHRFAM7AQ494W8 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHRFAM7AQ494W8 AL592295.1-201ENST00000400984 884 ntBASIC20.69■□□□□ 0.9
CHRFAM7AQ494W8 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.69■□□□□ 0.9
CHRFAM7AQ494W8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.69■□□□□ 0.9
CHRFAM7AQ494W8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHRFAM7AQ494W8 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHRFAM7AQ494W8 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.68■□□□□ 0.9
CHRFAM7AQ494W8 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHRFAM7AQ494W8 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHRFAM7AQ494W8 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
CHRFAM7AQ494W8 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHRFAM7AQ494W8 AL592293.1-201ENST00000502889 1188 ntBASIC20.68■□□□□ 0.9
CHRFAM7AQ494W8 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHRFAM7AQ494W8 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.68■□□□□ 0.9
CHRFAM7AQ494W8 AC007029.1-201ENST00000604183 313 ntBASIC20.68■□□□□ 0.9
CHRFAM7AQ494W8 AC133552.2-201ENST00000619106 1032 ntBASIC20.68■□□□□ 0.9
CHRFAM7AQ494W8 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHRFAM7AQ494W8 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHRFAM7AQ494W8 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.67■□□□□ 0.9
CHRFAM7AQ494W8 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.67■□□□□ 0.9
CHRFAM7AQ494W8 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHRFAM7AQ494W8 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.67■□□□□ 0.9
CHRFAM7AQ494W8 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CHRFAM7AQ494W8 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.67■□□□□ 0.9
CHRFAM7AQ494W8 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHRFAM7AQ494W8 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHRFAM7AQ494W8 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHRFAM7AQ494W8 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms