Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLDN20P56880 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLDN20P56880 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLDN20P56880 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLDN20P56880 AL592293.1-201ENST00000502889 1188 ntBASIC21.95■■□□□ 1.1
CLDN20P56880 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CLDN20P56880 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CLDN20P56880 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLDN20P56880 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.94■■□□□ 1.1
CLDN20P56880 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLDN20P56880 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
CLDN20P56880 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.94■■□□□ 1.1
CLDN20P56880 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLDN20P56880 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.94■■□□□ 1.1
CLDN20P56880 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLDN20P56880 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLDN20P56880 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLDN20P56880 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CLDN20P56880 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.93■■□□□ 1.1
CLDN20P56880 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLDN20P56880 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.93■■□□□ 1.1
CLDN20P56880 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.93■■□□□ 1.1
CLDN20P56880 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.93■■□□□ 1.1
CLDN20P56880 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
CLDN20P56880 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.92■■□□□ 1.1
CLDN20P56880 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.92■■□□□ 1.1
CLDN20P56880 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CLDN20P56880 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLDN20P56880 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLDN20P56880 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CLDN20P56880 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.91■■□□□ 1.1
CLDN20P56880 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.9■■□□□ 1.1
CLDN20P56880 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CLDN20P56880 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLDN20P56880 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLDN20P56880 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.9■■□□□ 1.1
CLDN20P56880 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.9■■□□□ 1.1
CLDN20P56880 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CLDN20P56880 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLDN20P56880 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
CLDN20P56880 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
CLDN20P56880 AC012354.3-201ENST00000623734 483 ntBASIC21.89■■□□□ 1.09
CLDN20P56880 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLDN20P56880 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLDN20P56880 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLDN20P56880 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLDN20P56880 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.87■■□□□ 1.09
CLDN20P56880 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLDN20P56880 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CLDN20P56880 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CLDN20P56880 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLDN20P56880 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.87■■□□□ 1.09
CLDN20P56880 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CLDN20P56880 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.87■■□□□ 1.09
CLDN20P56880 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLDN20P56880 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.87■■□□□ 1.09
CLDN20P56880 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLDN20P56880 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CLDN20P56880 AC129492.7-201ENST00000622992 756 ntBASIC21.86■■□□□ 1.09
CLDN20P56880 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
CLDN20P56880 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLDN20P56880 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
CLDN20P56880 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CLDN20P56880 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLDN20P56880 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLDN20P56880 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CLDN20P56880 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.85■■□□□ 1.09
CLDN20P56880 AC145676.1-201ENST00000514988 2004 ntBASIC21.85■■□□□ 1.09
CLDN20P56880 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.84■■□□□ 1.09
CLDN20P56880 AC004987.1-201ENST00000428627 508 ntBASIC21.84■■□□□ 1.09
CLDN20P56880 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
CLDN20P56880 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLDN20P56880 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CLDN20P56880 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CLDN20P56880 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLDN20P56880 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CLDN20P56880 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
CLDN20P56880 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLDN20P56880 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLDN20P56880 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.83■■□□□ 1.09
CLDN20P56880 SPCS2P3-201ENST00000500401 656 ntBASIC21.83■■□□□ 1.09
CLDN20P56880 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
CLDN20P56880 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.09
CLDN20P56880 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CLDN20P56880 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CLDN20P56880 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.82■■□□□ 1.08
CLDN20P56880 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLDN20P56880 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CLDN20P56880 ATP5G2P3-201ENST00000429083 425 ntBASIC21.82■■□□□ 1.08
CLDN20P56880 AL033527.3-201ENST00000566366 1196 ntBASIC21.82■■□□□ 1.08
CLDN20P56880 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.82■■□□□ 1.08
CLDN20P56880 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLDN20P56880 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLDN20P56880 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLDN20P56880 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CLDN20P56880 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLDN20P56880 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.82■■□□□ 1.08
CLDN20P56880 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLDN20P56880 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CLDN20P56880 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms