Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN12P56749 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.79■□□□□ 0.92
CLDN12P56749 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN12P56749 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN12P56749 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CLDN12P56749 LINC01124-201ENST00000409786 2117 ntBASIC20.78■□□□□ 0.92
CLDN12P56749 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
CLDN12P56749 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN12P56749 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN12P56749 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.78■□□□□ 0.92
CLDN12P56749 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
CLDN12P56749 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN12P56749 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN12P56749 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN12P56749 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN12P56749 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN12P56749 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CLDN12P56749 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN12P56749 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN12P56749 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.76■□□□□ 0.91
CLDN12P56749 AC044849.2-201ENST00000606596 710 ntBASIC20.76■□□□□ 0.91
CLDN12P56749 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN12P56749 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN12P56749 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN12P56749 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN12P56749 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN12P56749 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN12P56749 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.75■□□□□ 0.91
CLDN12P56749 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.75■□□□□ 0.91
CLDN12P56749 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.75■□□□□ 0.91
CLDN12P56749 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN12P56749 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.75■□□□□ 0.91
CLDN12P56749 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN12P56749 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN12P56749 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN12P56749 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN12P56749 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.75■□□□□ 0.91
CLDN12P56749 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CLDN12P56749 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
CLDN12P56749 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
CLDN12P56749 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CLDN12P56749 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN12P56749 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN12P56749 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN12P56749 AL162393.1-201ENST00000437852 946 ntBASIC20.74■□□□□ 0.91
CLDN12P56749 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.74■□□□□ 0.91
CLDN12P56749 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN12P56749 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.74■□□□□ 0.91
CLDN12P56749 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN12P56749 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CLDN12P56749 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.73■□□□□ 0.91
CLDN12P56749 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN12P56749 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN12P56749 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN12P56749 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN12P56749 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN12P56749 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN12P56749 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN12P56749 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN12P56749 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CLDN12P56749 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN12P56749 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN12P56749 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CLDN12P56749 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.72■□□□□ 0.91
CLDN12P56749 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN12P56749 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN12P56749 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CLDN12P56749 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CLDN12P56749 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN12P56749 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN12P56749 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.71■□□□□ 0.91
CLDN12P56749 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.7■□□□□ 0.91
CLDN12P56749 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CLDN12P56749 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CLDN12P56749 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.7■□□□□ 0.9
CLDN12P56749 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN12P56749 DUX4L29-201ENST00000425409 679 ntBASIC20.7■□□□□ 0.9
CLDN12P56749 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.7■□□□□ 0.9
CLDN12P56749 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.7■□□□□ 0.9
CLDN12P56749 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN12P56749 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CLDN12P56749 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN12P56749 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN12P56749 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN12P56749 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN12P56749 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN12P56749 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN12P56749 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN12P56749 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN12P56749 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN12P56749 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.68■□□□□ 0.9
CLDN12P56749 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CLDN12P56749 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN12P56749 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN12P56749 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN12P56749 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN12P56749 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN12P56749 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN12P56749 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CLDN12P56749 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms