Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CMC4P56277 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CMC4P56277 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC17.9■□□□□ 0.46
CMC4P56277 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CMC4P56277 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
CMC4P56277 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
CMC4P56277 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CMC4P56277 TSPY13P-201ENST00000338964 914 ntBASIC17.89■□□□□ 0.45
CMC4P56277 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CMC4P56277 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CMC4P56277 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC17.89■□□□□ 0.45
CMC4P56277 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CMC4P56277 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CMC4P56277 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CMC4P56277 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CMC4P56277 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CMC4P56277 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CMC4P56277 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC17.88■□□□□ 0.45
CMC4P56277 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CMC4P56277 PKM-203ENST00000389093 2279 ntTSL 5 BASIC17.88■□□□□ 0.45
CMC4P56277 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CMC4P56277 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CMC4P56277 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CMC4P56277 ATP5G2P3-201ENST00000429083 425 ntBASIC17.87■□□□□ 0.45
CMC4P56277 DUX4L9-201ENST00000449051 1259 ntBASIC17.87■□□□□ 0.45
CMC4P56277 AC139795.1-202ENST00000500444 432 ntBASIC17.87■□□□□ 0.45
CMC4P56277 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC17.87■□□□□ 0.45
CMC4P56277 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CMC4P56277 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CMC4P56277 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CMC4P56277 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CMC4P56277 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC17.86■□□□□ 0.45
CMC4P56277 AC092803.2-201ENST00000564287 1899 ntBASIC17.86■□□□□ 0.45
CMC4P56277 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
CMC4P56277 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CMC4P56277 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CMC4P56277 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC17.86■□□□□ 0.45
CMC4P56277 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CMC4P56277 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CMC4P56277 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CMC4P56277 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CMC4P56277 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CMC4P56277 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CMC4P56277 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CMC4P56277 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CMC4P56277 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CMC4P56277 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CMC4P56277 AC004987.1-201ENST00000428627 508 ntBASIC17.85■□□□□ 0.45
CMC4P56277 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC17.85■□□□□ 0.45
CMC4P56277 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CMC4P56277 SNAI3-AS1-204ENST00000567997 2048 ntBASIC17.85■□□□□ 0.45
CMC4P56277 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC17.85■□□□□ 0.45
CMC4P56277 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC17.84■□□□□ 0.45
CMC4P56277 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CMC4P56277 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC17.84■□□□□ 0.45
CMC4P56277 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CMC4P56277 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CMC4P56277 BHLHE23-202ENST00000612929 1109 ntBASIC17.84■□□□□ 0.45
CMC4P56277 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CMC4P56277 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CMC4P56277 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
CMC4P56277 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CMC4P56277 CREM-210ENST00000374721 2020 ntTSL 5 BASIC17.83■□□□□ 0.45
CMC4P56277 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CMC4P56277 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
CMC4P56277 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CMC4P56277 RPS2P7-201ENST00000447334 885 ntBASIC17.83■□□□□ 0.44
CMC4P56277 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CMC4P56277 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CMC4P56277 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CMC4P56277 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CMC4P56277 AC010501.1-201ENST00000606270 1962 ntBASIC17.82■□□□□ 0.44
CMC4P56277 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CMC4P56277 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CMC4P56277 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC17.82■□□□□ 0.44
CMC4P56277 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CMC4P56277 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CMC4P56277 MTX2-204ENST00000443241 799 ntTSL 3 BASIC17.82■□□□□ 0.44
CMC4P56277 AC087393.1-201ENST00000582896 145 ntBASIC17.82■□□□□ 0.44
CMC4P56277 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CMC4P56277 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CMC4P56277 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC17.82■□□□□ 0.44
CMC4P56277 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CMC4P56277 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CMC4P56277 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC17.81■□□□□ 0.44
CMC4P56277 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC17.81■□□□□ 0.44
CMC4P56277 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC17.81■□□□□ 0.44
CMC4P56277 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.81■□□□□ 0.44
CMC4P56277 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC17.81■□□□□ 0.44
CMC4P56277 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CMC4P56277 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CMC4P56277 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC17.81■□□□□ 0.44
CMC4P56277 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC17.81■□□□□ 0.44
CMC4P56277 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CMC4P56277 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CMC4P56277 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CMC4P56277 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC17.81■□□□□ 0.44
CMC4P56277 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CMC4P56277 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CMC4P56277 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms