Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 NDUFB8-204ENST00000464651 390 ntTSL 28.29□□□□□ -1.082e-9■■■■■ 46.1
SUB1P53999 TARS-202ENST00000455217 2523 ntTSL 2 BASIC7.55□□□□□ -1.25e-12■■■■■ 46.1
SUB1P53999 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.659e-10■■■■■ 46.1
SUB1P53999 IDH3A-207ENST00000558554 1595 ntTSL 2 BASIC9.5□□□□□ -0.897e-11■■■■■ 46.1
SUB1P53999 IDH3A-201ENST00000299518 4128 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.997e-11■■■■■ 46.1
SUB1P53999 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC8.56□□□□□ -1.047e-11■■■■■ 46.1
SUB1P53999 IDH3A-217ENST00000559889 2461 ntTSL 1 (best)7.07□□□□□ -1.287e-11■■■■■ 46.1
SUB1P53999 IDH3A-220ENST00000560667 2110 ntTSL 55.8□□□□□ -1.487e-11■■■■■ 46.1
SUB1P53999 IDH3A-206ENST00000558535 2586 ntTSL 1 (best)4.98□□□□□ -1.617e-11■■■■■ 46.1
SUB1P53999 IDH3A-204ENST00000558016 535 ntTSL 24.74□□□□□ -1.657e-11■■■■■ 46.1
SUB1P53999 IDH3A-208ENST00000558602 2217 ntTSL 23.86□□□□□ -1.797e-11■■■■■ 46.1
SUB1P53999 IDH3A-203ENST00000557960 424 ntTSL 32.23□□□□□ -2.057e-11■■■■■ 46.1
SUB1P53999 VTA1-203ENST00000452973 3177 ntTSL 2 BASIC9.46□□□□□ -0.897e-9■■■■■ 46.1
SUB1P53999 VTA1-205ENST00000620996 3272 ntTSL 3 BASIC7.98□□□□□ -1.137e-9■■■■■ 46.1
SUB1P53999 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.377e-9■■■■■ 46.1
SUB1P53999 SNRPE-203ENST00000469451 248 ntTSL 38.93□□□□□ -0.982e-21■■■■■ 46.1
SUB1P53999 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.217e-8■■■■■ 46.1
SUB1P53999 AKR1C1-205ENST00000477661 2637 ntTSL 55.9□□□□□ -1.467e-8■■■■■ 46.1
SUB1P53999 EIF4A2-224ENST00000495049 576 ntTSL 24.23□□□□□ -1.734e-7■■■■■ 46.1
SUB1P53999 CETN2-201ENST00000370277 1454 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.472e-6■■■■■ 46.1
SUB1P53999 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.289e-10■■■■■ 46
SUB1P53999 ACAT2-203ENST00000472052 1641 ntTSL 27.46□□□□□ -1.219e-10■■■■■ 46
SUB1P53999 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC11.71□□□□□ -0.531e-9■■■■■ 45.9
SUB1P53999 TRAFD1-202ENST00000412615 2697 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.921e-9■■■■■ 45.9
SUB1P53999 HSPH1-207ENST00000626866 4381 ntTSL 21.79□□□□□ -2.125e-8■■■■■ 45.6
SUB1P53999 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.283e-8■■■■■ 45.6
SUB1P53999 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.386e-8■■■■■ 45.6
SUB1P53999 HINT1-206ENST00000508495 825 ntTSL 1 (best)12.49□□□□□ -0.416e-8■■■■■ 45.6
SUB1P53999 HINT1-209ENST00000513345 656 ntTSL 211.88□□□□□ -0.516e-8■■■■■ 45.6
SUB1P53999 HINT1-207ENST00000511475 923 ntTSL 37.81□□□□□ -1.166e-8■■■■■ 45.6
SUB1P53999 LIG1-206ENST00000594067 2697 ntTSL 213.27□□□□□ -0.291e-16■■■■■ 45.6
SUB1P53999 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.571e-16■■■■■ 45.6
SUB1P53999 LIG1-214ENST00000597146 589 ntTSL 211.32□□□□□ -0.61e-16■■■■■ 45.6
SUB1P53999 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.671e-16■■■■■ 45.6
SUB1P53999 LIG1-218ENST00000599322 620 ntTSL 210.79□□□□□ -0.681e-16■■■■■ 45.6
SUB1P53999 LIG1-221ENST00000613670 3949 ntTSL 1 (best) BASIC10.46□□□□□ -0.741e-16■■■■■ 45.6
SUB1P53999 LIG1-207ENST00000594759 4102 ntTSL 1 (best)10.29□□□□□ -0.761e-16■■■■■ 45.6
SUB1P53999 LIG1-201ENST00000263274 3384 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.771e-16■■■■■ 45.6
SUB1P53999 LIG1-220ENST00000601091 3957 ntTSL 58.71□□□□□ -1.021e-16■■■■■ 45.6
SUB1P53999 GTSF1-206ENST00000549083 575 ntTSL 52.14□□□□□ -2.073e-18■■■■■ 45.5
SUB1P53999 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.842e-11■■■■■ 45.3
SUB1P53999 UBAC1-206ENST00000489050 864 ntTSL 36.45□□□□□ -1.382e-11■■■■■ 45.3
SUB1P53999 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.537e-7■■■■■ 45.1
SUB1P53999 HNRNPH3-211ENST00000491200 2308 ntTSL 1 (best)11.35□□□□□ -0.597e-7■■■■■ 45.1
SUB1P53999 CPED1-204ENST00000428526 2219 ntTSL 25.98□□□□□ -1.451e-9■■■■■ 45.1
SUB1P53999 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC5.41□□□□□ -1.541e-9■■■■■ 45.1
SUB1P53999 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC4.6□□□□□ -1.671e-9■■■■■ 45.1
SUB1P53999 CPED1-205ENST00000443817 1118 ntTSL 1 (best)3.74□□□□□ -1.811e-9■■■■■ 45.1
SUB1P53999 LETMD1-221ENST00000550100 1480 ntTSL 28.76□□□□□ -1.013e-10■■■■■ 45
SUB1P53999 SDHD-208ENST00000534010 460 ntTSL 27.98□□□□□ -1.132e-8■■■■■ 45
SUB1P53999 ATP6V0D1-211ENST00000565835 905 ntTSL 313.5□□□□□ -0.253e-9■■■■■ 45
SUB1P53999 ATP6V0D1-207ENST00000563305 1656 ntTSL 512.61□□□□□ -0.393e-9■■■■■ 45
SUB1P53999 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.423e-9■■■■■ 45
SUB1P53999 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.05□□□□□ -0.483e-9■■■■■ 45
SUB1P53999 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC10.69□□□□□ -0.73e-9■■■■■ 45
SUB1P53999 ATP6V0D1-217ENST00000568620 3390 ntTSL 29.62□□□□□ -0.873e-9■■■■■ 45
SUB1P53999 ATP6V0D1-202ENST00000426604 1257 ntTSL 28.45□□□□□ -1.063e-9■■■■■ 45
SUB1P53999 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.962e-8■■■■■ 44.9
SUB1P53999 MRPS28-208ENST00000521605 437 ntTSL 2 BASIC8.59□□□□□ -1.032e-8■■■■■ 44.9
SUB1P53999 MRPS28-207ENST00000521434 585 ntTSL 5 BASIC6.19□□□□□ -1.422e-8■■■■■ 44.9
SUB1P53999 MRPS28-205ENST00000519386 555 ntTSL 25.79□□□□□ -1.482e-8■■■■■ 44.9
SUB1P53999 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.532e-8■■■■■ 44.9
SUB1P53999 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.13□□□□□ -0.317e-8■■■■■ 44.9
SUB1P53999 MRPS18A-203ENST00000427312 803 ntTSL 1 (best)12.38□□□□□ -0.437e-8■■■■■ 44.9
SUB1P53999 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.447e-8■■■■■ 44.9
SUB1P53999 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.41e-8■■■■■ 44.9
SUB1P53999 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.411e-9■■■■■ 44.8
SUB1P53999 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.171e-9■■■■■ 44.8
SUB1P53999 MUS81-213ENST00000530928 1793 ntTSL 215.7■□□□□ 0.11e-9■■■■■ 44.8
SUB1P53999 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.011e-9■■■■■ 44.8
SUB1P53999 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC14.54□□□□□ -0.081e-9■■■■■ 44.8
SUB1P53999 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.151e-9■■■■■ 44.8
SUB1P53999 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.191e-9■■■■■ 44.8
SUB1P53999 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.191e-9■■■■■ 44.8
SUB1P53999 MUS81-202ENST00000524647 1817 ntTSL 513.71□□□□□ -0.221e-9■■■■■ 44.8
SUB1P53999 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC12.54□□□□□ -0.41e-9■■■■■ 44.8
SUB1P53999 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC12.51□□□□□ -0.411e-9■■■■■ 44.8
SUB1P53999 MUS81-208ENST00000529742 733 ntTSL 212.45□□□□□ -0.421e-9■■■■■ 44.8
SUB1P53999 GRK6-210ENST00000515666 2141 ntTSL 512.18□□□□□ -0.461e-9■■■■■ 44.8
SUB1P53999 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.1□□□□□ -0.471e-9■■■■■ 44.8
SUB1P53999 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.531e-9■■■■■ 44.8
SUB1P53999 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC11.7□□□□□ -0.541e-9■■■■■ 44.8
SUB1P53999 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.547e-8■■■■■ 44.8
SUB1P53999 MUS81-212ENST00000530282 755 ntTSL 211.52□□□□□ -0.571e-9■■■■■ 44.8
SUB1P53999 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.711e-9■■■■■ 44.8
SUB1P53999 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.84e-18■■■■■ 44.8
SUB1P53999 MUS81-216ENST00000533519 694 ntTSL 29.59□□□□□ -0.871e-9■■■■■ 44.8
SUB1P53999 TSPYL1-201ENST00000368608 3326 ntAPPRIS P1 BASIC9.59□□□□□ -0.871e-9■■■■■ 44.8
SUB1P53999 MUS81-214ENST00000531905 3420 ntTSL 59.19□□□□□ -0.941e-9■■■■■ 44.8
SUB1P53999 RPL26L1-206ENST00000521476 742 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.261e-9■■■■■ 44.8
SUB1P53999 RPL26L1-201ENST00000265100 722 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.261e-9■■■■■ 44.8
SUB1P53999 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.481e-9■■■■■ 44.8
SUB1P53999 MUS81-203ENST00000525006 434 ntTSL 35.21□□□□□ -1.581e-9■■■■■ 44.8
SUB1P53999 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.17□□□□□ -1.581e-9■■■■■ 44.8
SUB1P53999 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.791e-9■■■■■ 44.8
SUB1P53999 TAX1BP1-208ENST00000457186 1174 ntTSL 53.48□□□□□ -1.851e-9■■■■■ 44.8
SUB1P53999 INTS13-205ENST00000538155 1378 ntTSL 52.5□□□□□ -2.014e-18■■■■■ 44.8
SUB1P53999 INTS13-204ENST00000538016 535 ntTSL 22.26□□□□□ -2.054e-18■■■■■ 44.8
SUB1P53999 NGRN-201ENST00000331497 2784 ntTSL 1 (best)12.27□□□□□ -0.458e-10■■■■■ 44.8
SUB1P53999 NGRN-202ENST00000379095 7237 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.788e-10■■■■■ 44.8
Retrieved 100 of 11,644 protein–RNA pairs in 39.6 ms