Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF144AP50876 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF144AP50876 AC096887.2-201ENST00000623443 1957 ntBASIC22.25■■□□□ 1.15
RNF144AP50876 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF144AP50876 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF144AP50876 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.24■■□□□ 1.15
RNF144AP50876 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF144AP50876 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
RNF144AP50876 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF144AP50876 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.23■■□□□ 1.15
RNF144AP50876 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.23■■□□□ 1.15
RNF144AP50876 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF144AP50876 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RNF144AP50876 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF144AP50876 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.22■■□□□ 1.15
RNF144AP50876 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RNF144AP50876 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.22■■□□□ 1.15
RNF144AP50876 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RNF144AP50876 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RNF144AP50876 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.22■■□□□ 1.15
RNF144AP50876 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
RNF144AP50876 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
RNF144AP50876 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF144AP50876 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RNF144AP50876 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RNF144AP50876 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF144AP50876 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
RNF144AP50876 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF144AP50876 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RNF144AP50876 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC22.21■■□□□ 1.15
RNF144AP50876 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
RNF144AP50876 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF144AP50876 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.21■■□□□ 1.15
RNF144AP50876 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF144AP50876 AC093536.1-201ENST00000569153 554 ntBASIC22.2■■□□□ 1.14
RNF144AP50876 MIR3960-201ENST00000583311 91 ntBASIC22.2■■□□□ 1.14
RNF144AP50876 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC22.2■■□□□ 1.14
RNF144AP50876 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.2■■□□□ 1.14
RNF144AP50876 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF144AP50876 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
RNF144AP50876 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF144AP50876 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
RNF144AP50876 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC22.19■■□□□ 1.14
RNF144AP50876 HSD17B1P1-201ENST00000590052 955 ntBASIC22.19■■□□□ 1.14
RNF144AP50876 AC007029.1-201ENST00000604183 313 ntBASIC22.19■■□□□ 1.14
RNF144AP50876 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
RNF144AP50876 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RNF144AP50876 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF144AP50876 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC22.18■■□□□ 1.14
RNF144AP50876 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF144AP50876 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
RNF144AP50876 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RNF144AP50876 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RNF144AP50876 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF144AP50876 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.17■■□□□ 1.14
RNF144AP50876 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC22.17■■□□□ 1.14
RNF144AP50876 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RNF144AP50876 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RNF144AP50876 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
RNF144AP50876 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RNF144AP50876 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RNF144AP50876 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
RNF144AP50876 RP9P-202ENST00000450133 1212 ntBASIC22.16■■□□□ 1.14
RNF144AP50876 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RNF144AP50876 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.16■■□□□ 1.14
RNF144AP50876 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF144AP50876 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
RNF144AP50876 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.15■■□□□ 1.14
RNF144AP50876 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC22.14■■□□□ 1.14
RNF144AP50876 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.14■■□□□ 1.14
RNF144AP50876 RNF126P1-201ENST00000567452 1320 ntBASIC22.14■■□□□ 1.14
RNF144AP50876 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.14■■□□□ 1.13
RNF144AP50876 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
RNF144AP50876 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC22.14■■□□□ 1.13
RNF144AP50876 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
RNF144AP50876 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
RNF144AP50876 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.14■■□□□ 1.13
RNF144AP50876 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.14■■□□□ 1.13
RNF144AP50876 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.13■■□□□ 1.13
RNF144AP50876 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
RNF144AP50876 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RNF144AP50876 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.12■■□□□ 1.13
RNF144AP50876 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.12■■□□□ 1.13
RNF144AP50876 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC22.12■■□□□ 1.13
RNF144AP50876 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
RNF144AP50876 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RNF144AP50876 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.11■■□□□ 1.13
RNF144AP50876 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RNF144AP50876 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF144AP50876 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
RNF144AP50876 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RNF144AP50876 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC22.1■■□□□ 1.13
RNF144AP50876 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
RNF144AP50876 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF144AP50876 RARRES2P2-201ENST00000394842 485 ntBASIC22.09■■□□□ 1.13
RNF144AP50876 AC026202.3-201ENST00000600805 1127 ntBASIC22.09■■□□□ 1.13
RNF144AP50876 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF144AP50876 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.09■■□□□ 1.13
RNF144AP50876 AC009831.1-201ENST00000580420 1582 ntBASIC22.08■■□□□ 1.13
RNF144AP50876 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms