Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
SLC6A12P48065 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.31■■□□□ 1.32
SLC6A12P48065 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.31■■□□□ 1.32
SLC6A12P48065 RNF126P1-201ENST00000567452 1320 ntBASIC23.31■■□□□ 1.32
SLC6A12P48065 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
SLC6A12P48065 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SLC6A12P48065 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.3■■□□□ 1.32
SLC6A12P48065 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.3■■□□□ 1.32
SLC6A12P48065 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SLC6A12P48065 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SLC6A12P48065 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
SLC6A12P48065 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
SLC6A12P48065 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.28■■□□□ 1.32
SLC6A12P48065 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
SLC6A12P48065 RAP2CP1-202ENST00000605179 643 ntBASIC23.28■■□□□ 1.32
SLC6A12P48065 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SLC6A12P48065 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SLC6A12P48065 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.27■■□□□ 1.32
SLC6A12P48065 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
SLC6A12P48065 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SLC6A12P48065 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SLC6A12P48065 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.27■■□□□ 1.32
SLC6A12P48065 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.31
SLC6A12P48065 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SLC6A12P48065 AC026202.3-201ENST00000600805 1127 ntBASIC23.26■■□□□ 1.31
SLC6A12P48065 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SLC6A12P48065 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
SLC6A12P48065 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SLC6A12P48065 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SLC6A12P48065 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.25■■□□□ 1.31
SLC6A12P48065 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SLC6A12P48065 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SLC6A12P48065 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SLC6A12P48065 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
SLC6A12P48065 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SLC6A12P48065 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SLC6A12P48065 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SLC6A12P48065 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SLC6A12P48065 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SLC6A12P48065 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SLC6A12P48065 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SLC6A12P48065 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SLC6A12P48065 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
SLC6A12P48065 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.23■■□□□ 1.31
SLC6A12P48065 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SLC6A12P48065 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SLC6A12P48065 AC097639.1-201ENST00000565519 1891 ntBASIC23.23■■□□□ 1.31
SLC6A12P48065 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SLC6A12P48065 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SLC6A12P48065 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.22■■□□□ 1.31
SLC6A12P48065 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
SLC6A12P48065 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
SLC6A12P48065 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SLC6A12P48065 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SLC6A12P48065 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SLC6A12P48065 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.22■■□□□ 1.31
SLC6A12P48065 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SLC6A12P48065 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SLC6A12P48065 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SLC6A12P48065 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SLC6A12P48065 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SLC6A12P48065 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.22■■□□□ 1.31
SLC6A12P48065 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
SLC6A12P48065 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SLC6A12P48065 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.21■■□□□ 1.31
SLC6A12P48065 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SLC6A12P48065 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.2■■□□□ 1.3
SLC6A12P48065 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
SLC6A12P48065 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
SLC6A12P48065 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.2■■□□□ 1.3
SLC6A12P48065 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SLC6A12P48065 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
SLC6A12P48065 HSD17B1P1-201ENST00000590052 955 ntBASIC23.2■■□□□ 1.3
SLC6A12P48065 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SLC6A12P48065 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.19■■□□□ 1.3
SLC6A12P48065 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SLC6A12P48065 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SLC6A12P48065 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.19■■□□□ 1.3
SLC6A12P48065 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SLC6A12P48065 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.19■■□□□ 1.3
SLC6A12P48065 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.19■■□□□ 1.3
SLC6A12P48065 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.19■■□□□ 1.3
SLC6A12P48065 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SLC6A12P48065 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.18■■□□□ 1.3
SLC6A12P48065 AC009831.1-201ENST00000580420 1582 ntBASIC23.18■■□□□ 1.3
SLC6A12P48065 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SLC6A12P48065 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SLC6A12P48065 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.18■■□□□ 1.3
SLC6A12P48065 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
SLC6A12P48065 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SLC6A12P48065 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SLC6A12P48065 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
SLC6A12P48065 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SLC6A12P48065 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.18■■□□□ 1.3
SLC6A12P48065 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SLC6A12P48065 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SLC6A12P48065 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.17■■□□□ 1.3
SLC6A12P48065 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
SLC6A12P48065 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SLC6A12P48065 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms