Protein–RNA interactions for Protein: P32971

TNFSF8, Tumor necrosis factor ligand superfamily member 8, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF8P32971 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNFSF8P32971 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.03■□□□□ 0.96
TNFSF8P32971 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNFSF8P32971 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNFSF8P32971 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNFSF8P32971 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.03■□□□□ 0.96
TNFSF8P32971 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TNFSF8P32971 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TNFSF8P32971 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNFSF8P32971 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNFSF8P32971 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNFSF8P32971 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TNFSF8P32971 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TNFSF8P32971 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.02■□□□□ 0.96
TNFSF8P32971 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TNFSF8P32971 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TNFSF8P32971 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
TNFSF8P32971 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TNFSF8P32971 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
TNFSF8P32971 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.01■□□□□ 0.95
TNFSF8P32971 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TNFSF8P32971 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
TNFSF8P32971 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
TNFSF8P32971 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
TNFSF8P32971 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.01■□□□□ 0.95
TNFSF8P32971 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TNFSF8P32971 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TNFSF8P32971 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TNFSF8P32971 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TNFSF8P32971 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
TNFSF8P32971 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TNFSF8P32971 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21■□□□□ 0.95
TNFSF8P32971 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TNFSF8P32971 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TNFSF8P32971 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TNFSF8P32971 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TNFSF8P32971 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.99■□□□□ 0.95
TNFSF8P32971 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TNFSF8P32971 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TNFSF8P32971 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TNFSF8P32971 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TNFSF8P32971 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TNFSF8P32971 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TNFSF8P32971 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.98■□□□□ 0.95
TNFSF8P32971 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.98■□□□□ 0.95
TNFSF8P32971 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFSF8P32971 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TNFSF8P32971 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFSF8P32971 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TNFSF8P32971 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.98■□□□□ 0.95
TNFSF8P32971 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFSF8P32971 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
TNFSF8P32971 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFSF8P32971 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFSF8P32971 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TNFSF8P32971 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFSF8P32971 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TNFSF8P32971 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNFSF8P32971 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNFSF8P32971 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNFSF8P32971 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
TNFSF8P32971 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.96■□□□□ 0.95
TNFSF8P32971 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TNFSF8P32971 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.95■□□□□ 0.94
TNFSF8P32971 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TNFSF8P32971 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.95■□□□□ 0.94
TNFSF8P32971 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TNFSF8P32971 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNFSF8P32971 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
TNFSF8P32971 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNFSF8P32971 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNFSF8P32971 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TNFSF8P32971 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TNFSF8P32971 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TNFSF8P32971 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.93■□□□□ 0.94
TNFSF8P32971 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TNFSF8P32971 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TNFSF8P32971 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
TNFSF8P32971 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
TNFSF8P32971 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
TNFSF8P32971 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
TNFSF8P32971 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.92■□□□□ 0.94
TNFSF8P32971 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TNFSF8P32971 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TNFSF8P32971 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC20.92■□□□□ 0.94
TNFSF8P32971 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TNFSF8P32971 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TNFSF8P32971 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.92■□□□□ 0.94
TNFSF8P32971 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TNFSF8P32971 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
TNFSF8P32971 C9orf163-202ENST00000624034 2573 ntBASIC20.92■□□□□ 0.94
TNFSF8P32971 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
TNFSF8P32971 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TNFSF8P32971 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.91■□□□□ 0.94
TNFSF8P32971 LINC00273-201ENST00000539813 1452 ntBASIC20.91■□□□□ 0.94
TNFSF8P32971 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.91■□□□□ 0.94
TNFSF8P32971 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
TNFSF8P32971 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
TNFSF8P32971 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNFSF8P32971 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms