Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC30.19■■■□□ 2.42
CHRNA5P30532 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CHRNA5P30532 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CHRNA5P30532 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC30.18■■■□□ 2.42
CHRNA5P30532 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CHRNA5P30532 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC30.18■■■□□ 2.42
CHRNA5P30532 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CHRNA5P30532 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC30.17■■■□□ 2.42
CHRNA5P30532 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC30.17■■■□□ 2.42
CHRNA5P30532 AC005837.3-201ENST00000612163 286 ntBASIC30.17■■■□□ 2.42
CHRNA5P30532 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CHRNA5P30532 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CHRNA5P30532 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC30.16■■■□□ 2.42
CHRNA5P30532 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CHRNA5P30532 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CHRNA5P30532 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC30.15■■■□□ 2.42
CHRNA5P30532 AL117332.1-201ENST00000622628 974 ntBASIC30.15■■■□□ 2.42
CHRNA5P30532 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
CHRNA5P30532 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC30.15■■■□□ 2.42
CHRNA5P30532 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CHRNA5P30532 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CHRNA5P30532 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC30.14■■■□□ 2.42
CHRNA5P30532 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
CHRNA5P30532 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CHRNA5P30532 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CHRNA5P30532 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CHRNA5P30532 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CHRNA5P30532 AC096631.2-201ENST00000436136 790 ntBASIC30.12■■■□□ 2.41
CHRNA5P30532 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC30.12■■■□□ 2.41
CHRNA5P30532 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CHRNA5P30532 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CHRNA5P30532 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC30.11■■■□□ 2.41
CHRNA5P30532 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC30.11■■■□□ 2.41
CHRNA5P30532 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
CHRNA5P30532 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
CHRNA5P30532 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC30.1■■■□□ 2.41
CHRNA5P30532 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CHRNA5P30532 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC30.1■■■□□ 2.41
CHRNA5P30532 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC30.1■■■□□ 2.41
CHRNA5P30532 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
CHRNA5P30532 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CHRNA5P30532 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CHRNA5P30532 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CHRNA5P30532 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC30.09■■■□□ 2.41
CHRNA5P30532 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC30.09■■■□□ 2.41
CHRNA5P30532 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC30.08■■■□□ 2.41
CHRNA5P30532 KRT18P10-201ENST00000388836 1287 ntBASIC30.08■■■□□ 2.41
CHRNA5P30532 MIR3621-201ENST00000580529 85 ntBASIC30.08■■■□□ 2.41
CHRNA5P30532 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CHRNA5P30532 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC30.08■■■□□ 2.41
CHRNA5P30532 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CHRNA5P30532 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC30.08■■■□□ 2.41
CHRNA5P30532 MIR4466-201ENST00000606121 54 ntBASIC30.07■■■□□ 2.4
CHRNA5P30532 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
CHRNA5P30532 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CHRNA5P30532 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CHRNA5P30532 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
CHRNA5P30532 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC30.06■■■□□ 2.4
CHRNA5P30532 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC30.06■■■□□ 2.4
CHRNA5P30532 AC010997.5-201ENST00000609182 354 ntBASIC30.06■■■□□ 2.4
CHRNA5P30532 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CHRNA5P30532 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC30.06■■■□□ 2.4
CHRNA5P30532 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CHRNA5P30532 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
CHRNA5P30532 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
CHRNA5P30532 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC30.05■■■□□ 2.4
CHRNA5P30532 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC30.05■■■□□ 2.4
CHRNA5P30532 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CHRNA5P30532 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
CHRNA5P30532 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CHRNA5P30532 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC30.04■■■□□ 2.4
CHRNA5P30532 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC30.04■■■□□ 2.4
CHRNA5P30532 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC30.03■■■□□ 2.4
CHRNA5P30532 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CHRNA5P30532 MIR4281-201ENST00000580852 62 ntBASIC30.03■■■□□ 2.4
CHRNA5P30532 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CHRNA5P30532 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC30.03■■■□□ 2.4
CHRNA5P30532 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC30.03■■■□□ 2.4
CHRNA5P30532 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC30.03■■■□□ 2.4
CHRNA5P30532 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
CHRNA5P30532 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC30.02■■■□□ 2.4
CHRNA5P30532 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC30.02■■■□□ 2.4
CHRNA5P30532 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
CHRNA5P30532 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
CHRNA5P30532 LSM4-201ENST00000252816 986 ntTSL 2 BASIC30.01■■■□□ 2.39
CHRNA5P30532 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
CHRNA5P30532 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC30.01■■■□□ 2.39
CHRNA5P30532 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC30■■■□□ 2.39
CHRNA5P30532 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC30■■■□□ 2.39
CHRNA5P30532 AC092666.2-201ENST00000613287 246 ntBASIC30■■■□□ 2.39
CHRNA5P30532 MIR6724-1-201ENST00000616420 92 ntBASIC30■■■□□ 2.39
CHRNA5P30532 MIR6724-2-201ENST00000616483 92 ntBASIC30■■■□□ 2.39
CHRNA5P30532 MIR6724-4-201ENST00000617390 92 ntBASIC30■■■□□ 2.39
CHRNA5P30532 MIR6724-3-201ENST00000622482 92 ntBASIC30■■■□□ 2.39
CHRNA5P30532 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC29.99■■■□□ 2.39
CHRNA5P30532 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CHRNA5P30532 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC29.99■■■□□ 2.39
CHRNA5P30532 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
CHRNA5P30532 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.39
CHRNA5P30532 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC29.98■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms