Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 YBL070CYBL070C 321 nt6.68□□□□□ -1.34
MSH1P25846 KTR1YOR099W 1182 nt6.68□□□□□ -1.34
MSH1P25846 VMA4YOR332W 702 nt6.68□□□□□ -1.34
MSH1P25846 ECM2YBR065C 1095 nt6.68□□□□□ -1.34
MSH1P25846 NHP6BYBR089C-A 300 nt6.68□□□□□ -1.34
MSH1P25846 PXL1YKR090W 2121 nt6.68□□□□□ -1.34
MSH1P25846 KEX2YNL238W 2445 nt6.68□□□□□ -1.34
MSH1P25846 PET112YBL080C 1626 nt6.68□□□□□ -1.34
MSH1P25846 MCM6YGL201C 3054 nt6.68□□□□□ -1.34
MSH1P25846 PSR2YLR019W 1194 nt6.67□□□□□ -1.34
MSH1P25846 YPL257WYPL257W 582 nt6.67□□□□□ -1.34
MSH1P25846 SWD1YAR003W 1281 nt6.66□□□□□ -1.34
MSH1P25846 TAF11YML015C 1041 nt6.66□□□□□ -1.34
MSH1P25846 BZZ1YHR114W 1902 nt6.66□□□□□ -1.34
MSH1P25846 YDL023CYDL023C 321 nt6.65□□□□□ -1.34
MSH1P25846 YIR020W-AYIR020W-A 243 nt6.65□□□□□ -1.34
MSH1P25846 YMR147WYMR147W 672 nt6.65□□□□□ -1.34
MSH1P25846 LDB16YCL005W 771 nt6.65□□□□□ -1.34
MSH1P25846 YTP1YNL237W 1380 nt6.65□□□□□ -1.35
MSH1P25846 NUP49YGL172W 1419 nt6.65□□□□□ -1.35
MSH1P25846 ALD6YPL061W 1503 nt6.65□□□□□ -1.35
MSH1P25846 MRPL23YOR150W 492 nt6.64□□□□□ -1.35
MSH1P25846 YMR027WYMR027W 1413 nt6.64□□□□□ -1.35
MSH1P25846 CLB1YGR108W 1416 nt6.63□□□□□ -1.35
MSH1P25846 ASF1YJL115W 840 nt6.63□□□□□ -1.35
MSH1P25846 LCB3YJL134W 1230 nt6.63□□□□□ -1.35
MSH1P25846 MDE1YJR024C 735 nt6.63□□□□□ -1.35
MSH1P25846 HMT1YBR034C 1047 nt6.63□□□□□ -1.35
MSH1P25846 GUF1YLR289W 1938 nt6.62□□□□□ -1.35
MSH1P25846 RPL7AYGL076C 735 nt6.62□□□□□ -1.35
MSH1P25846 YGL235WYGL235W 537 nt6.62□□□□□ -1.35
MSH1P25846 MRS1YIR021W 1092 nt6.62□□□□□ -1.35
MSH1P25846 YKL077WYKL077W 1179 nt6.62□□□□□ -1.35
MSH1P25846 TAF9YMR236W 474 nt6.62□□□□□ -1.35
MSH1P25846 YNL194CYNL194C 906 nt6.62□□□□□ -1.35
MSH1P25846 MRPS18YNL306W 654 nt6.62□□□□□ -1.35
MSH1P25846 YOL163WYOL163W 510 nt6.62□□□□□ -1.35
MSH1P25846 DAP1YPL170W 459 nt6.62□□□□□ -1.35
MSH1P25846 RPL7BYPL198W 735 nt6.62□□□□□ -1.35
MSH1P25846 MNN5YJL186W 1761 nt6.62□□□□□ -1.35
MSH1P25846 PKC1YBL105C 3456 nt6.62□□□□□ -1.35
MSH1P25846 ALT2YDR111C 1524 nt6.61□□□□□ -1.35
MSH1P25846 MSN2YMR037C 2115 nt6.61□□□□□ -1.35
MSH1P25846 LSG1YGL099W 1923 nt6.61□□□□□ -1.35
MSH1P25846 EAF5YEL018W 840 nt6.61□□□□□ -1.35
MSH1P25846 AIM20YIL158W 615 nt6.61□□□□□ -1.35
MSH1P25846 HSP150YJL159W 1242 nt6.61□□□□□ -1.35
MSH1P25846 AST1YBL069W 1290 nt6.61□□□□□ -1.35
MSH1P25846 YPL136WYPL136W 369 nt6.61□□□□□ -1.35
MSH1P25846 DEF1YKL054C 2217 nt6.61□□□□□ -1.35
MSH1P25846 PRP40YKL012W 1752 nt6.6□□□□□ -1.35
MSH1P25846 TEP1YNL128W 1305 nt6.6□□□□□ -1.35
MSH1P25846 IMG1YCR046C 510 nt6.6□□□□□ -1.35
MSH1P25846 LCL3YGL085W 825 nt6.6□□□□□ -1.35
MSH1P25846 FMO1YHR176W 1299 nt6.6□□□□□ -1.35
MSH1P25846 YIL029W-AYIL029W-A 372 nt6.6□□□□□ -1.35
MSH1P25846 YGR054WYGR054W 1929 nt6.6□□□□□ -1.35
MSH1P25846 MCH1YDL054C 1461 nt6.6□□□□□ -1.35
MSH1P25846 RPE1YJL121C 717 nt6.59□□□□□ -1.35
MSH1P25846 CRH1YGR189C 1524 nt6.59□□□□□ -1.35
MSH1P25846 SLX5YDL013W 1860 nt6.58□□□□□ -1.36
MSH1P25846 FAL1YDR021W 1200 nt6.58□□□□□ -1.36
MSH1P25846 POR2YIL114C 846 nt6.58□□□□□ -1.36
MSH1P25846 POP5YAL033W 522 nt6.58□□□□□ -1.36
MSH1P25846 GLN1YPR035W 1113 nt6.58□□□□□ -1.36
MSH1P25846 NTE1YML059C 5040 nt6.58□□□□□ -1.36
MSH1P25846 VPS70YJR126C 2436 nt6.58□□□□□ -1.36
MSH1P25846 YMR119W-AYMR119W-A 375 nt6.57□□□□□ -1.36
MSH1P25846 RNH1YMR234W 1047 nt6.57□□□□□ -1.36
MSH1P25846 CWC25YNL245C 540 nt6.57□□□□□ -1.36
MSH1P25846 YNR048WYNR048W 1182 nt6.57□□□□□ -1.36
MSH1P25846 YNL247WYNL247W 2304 nt6.57□□□□□ -1.36
MSH1P25846 RSC2YLR357W 2670 nt6.57□□□□□ -1.36
MSH1P25846 SAL1YNL083W 1485 nt6.56□□□□□ -1.36
MSH1P25846 PMP3YDR276C 168 nt6.56□□□□□ -1.36
MSH1P25846 OPI7YDR360W 435 nt6.56□□□□□ -1.36
MSH1P25846 MED6YHR058C 888 nt6.56□□□□□ -1.36
MSH1P25846 JJJ3YJR097W 519 nt6.56□□□□□ -1.36
MSH1P25846 TFB4YPR056W 1017 nt6.56□□□□□ -1.36
MSH1P25846 BPL1YDL141W 2073 nt6.56□□□□□ -1.36
MSH1P25846 HXT15YDL245C 1704 nt6.56□□□□□ -1.36
MSH1P25846 HXT16YJR158W 1704 nt6.56□□□□□ -1.36
MSH1P25846 QNS1YHR074W 2145 nt6.55□□□□□ -1.36
MSH1P25846 YDL085C-AYDL085C-A 207 nt6.55□□□□□ -1.36
MSH1P25846 GCG1YER163C 699 nt6.55□□□□□ -1.36
MSH1P25846 APM1YPL259C 1428 nt6.55□□□□□ -1.36
MSH1P25846 SFB3YHR098C 2790 nt6.55□□□□□ -1.36
MSH1P25846 MKK2YPL140C 1521 nt6.55□□□□□ -1.36
MSH1P25846 VPS72YDR485C 2388 nt6.54□□□□□ -1.36
MSH1P25846 SNF11YDR073W 510 nt6.54□□□□□ -1.36
MSH1P25846 LYS1YIR034C 1122 nt6.54□□□□□ -1.36
MSH1P25846 YKL102CYKL102C 306 nt6.54□□□□□ -1.36
MSH1P25846 MEH1YKR007W 555 nt6.54□□□□□ -1.36
MSH1P25846 CCP1YKR066C 1086 nt6.54□□□□□ -1.36
MSH1P25846 ATG18YFR021W 1503 nt6.54□□□□□ -1.36
MSH1P25846 ARE2YNR019W 1929 nt6.54□□□□□ -1.36
MSH1P25846 YHR070C-AYHR070C-A 411 nt6.53□□□□□ -1.36
MSH1P25846 YHR213W-BYHR213W-B 300 nt6.53□□□□□ -1.36
MSH1P25846 YRB2YIL063C 984 nt6.53□□□□□ -1.36
MSH1P25846 YJU2YKL095W 837 nt6.53□□□□□ -1.36
Retrieved 100 of 7,029 protein–RNA pairs in 14.5 ms