Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC26.72■■□□□ 1.87
SYN1P17600 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
SYN1P17600 AP002414.2-202ENST00000590929 1450 ntBASIC26.71■■□□□ 1.87
SYN1P17600 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SYN1P17600 AL356740.2-201ENST00000601559 647 ntBASIC26.71■■□□□ 1.87
SYN1P17600 MIR6724-1-201ENST00000616420 92 ntBASIC26.71■■□□□ 1.87
SYN1P17600 MIR6724-2-201ENST00000616483 92 ntBASIC26.71■■□□□ 1.87
SYN1P17600 MIR6724-4-201ENST00000617390 92 ntBASIC26.71■■□□□ 1.87
SYN1P17600 MIR6724-3-201ENST00000622482 92 ntBASIC26.71■■□□□ 1.87
SYN1P17600 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
SYN1P17600 ABCB10P3-201ENST00000561950 2166 ntBASIC26.71■■□□□ 1.87
SYN1P17600 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
SYN1P17600 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
SYN1P17600 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SYN1P17600 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC26.7■■□□□ 1.86
SYN1P17600 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.7■■□□□ 1.86
SYN1P17600 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
SYN1P17600 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.7■■□□□ 1.86
SYN1P17600 ST7-AS1-201ENST00000456775 1889 ntBASIC26.7■■□□□ 1.86
SYN1P17600 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SYN1P17600 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.69■■□□□ 1.86
SYN1P17600 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.69■■□□□ 1.86
SYN1P17600 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
SYN1P17600 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.68■■□□□ 1.86
SYN1P17600 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.68■■□□□ 1.86
SYN1P17600 AC135279.3-201ENST00000610945 1311 ntBASIC26.67■■□□□ 1.86
SYN1P17600 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SYN1P17600 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC26.67■■□□□ 1.86
SYN1P17600 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC26.67■■□□□ 1.86
SYN1P17600 AC142381.2-201ENST00000566120 298 ntBASIC26.67■■□□□ 1.86
SYN1P17600 MTDHP2-201ENST00000601468 714 ntBASIC26.67■■□□□ 1.86
SYN1P17600 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SYN1P17600 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
SYN1P17600 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.66■■□□□ 1.86
SYN1P17600 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC26.66■■□□□ 1.86
SYN1P17600 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SYN1P17600 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.66■■□□□ 1.86
SYN1P17600 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SYN1P17600 LGR4-203ENST00000480977 492 ntTSL 2 BASIC26.66■■□□□ 1.86
SYN1P17600 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC26.66■■□□□ 1.86
SYN1P17600 MIR5787-201ENST00000611784 55 ntBASIC26.66■■□□□ 1.86
SYN1P17600 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SYN1P17600 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SYN1P17600 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
SYN1P17600 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC26.65■■□□□ 1.86
SYN1P17600 PBX2P1-201ENST00000493219 1291 ntBASIC26.65■■□□□ 1.86
SYN1P17600 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC26.65■■□□□ 1.86
SYN1P17600 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SYN1P17600 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.65■■□□□ 1.86
SYN1P17600 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.64■■□□□ 1.86
SYN1P17600 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SYN1P17600 QDPR-206ENST00000508623 601 ntTSL 3 BASIC26.64■■□□□ 1.86
SYN1P17600 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.64■■□□□ 1.86
SYN1P17600 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.63■■□□□ 1.85
SYN1P17600 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
SYN1P17600 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC26.63■■□□□ 1.85
SYN1P17600 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.63■■□□□ 1.85
SYN1P17600 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SYN1P17600 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SYN1P17600 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.62■■□□□ 1.85
SYN1P17600 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SYN1P17600 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.61■■□□□ 1.85
SYN1P17600 AL512631.2-201ENST00000604634 923 ntBASIC26.61■■□□□ 1.85
SYN1P17600 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC26.6■■□□□ 1.85
SYN1P17600 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
SYN1P17600 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SYN1P17600 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.6■■□□□ 1.85
SYN1P17600 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.6■■□□□ 1.85
SYN1P17600 AC106739.1-201ENST00000617035 715 ntBASIC26.6■■□□□ 1.85
SYN1P17600 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.6■■□□□ 1.85
SYN1P17600 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
SYN1P17600 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
SYN1P17600 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
SYN1P17600 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.59■■□□□ 1.85
SYN1P17600 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SYN1P17600 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
SYN1P17600 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SYN1P17600 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
SYN1P17600 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC26.58■■□□□ 1.85
SYN1P17600 MIR4281-201ENST00000580852 62 ntBASIC26.58■■□□□ 1.85
SYN1P17600 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.58■■□□□ 1.85
SYN1P17600 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SYN1P17600 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.57■■□□□ 1.84
SYN1P17600 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
SYN1P17600 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SYN1P17600 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC26.57■■□□□ 1.84
SYN1P17600 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC26.56■■□□□ 1.84
SYN1P17600 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SYN1P17600 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
SYN1P17600 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SYN1P17600 KRT18P10-201ENST00000388836 1287 ntBASIC26.55■■□□□ 1.84
SYN1P17600 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.55■■□□□ 1.84
SYN1P17600 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.55■■□□□ 1.84
SYN1P17600 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SYN1P17600 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
SYN1P17600 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
SYN1P17600 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SYN1P17600 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SYN1P17600 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SYN1P17600 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms