Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HIST1H1DP16402 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.33■□□□□ 0.84
HIST1H1DP16402 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HIST1H1DP16402 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIST1H1DP16402 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIST1H1DP16402 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIST1H1DP16402 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIST1H1DP16402 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIST1H1DP16402 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIST1H1DP16402 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIST1H1DP16402 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HIST1H1DP16402 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HIST1H1DP16402 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIST1H1DP16402 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIST1H1DP16402 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.31■□□□□ 0.84
HIST1H1DP16402 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.31■□□□□ 0.84
HIST1H1DP16402 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIST1H1DP16402 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIST1H1DP16402 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIST1H1DP16402 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.3■□□□□ 0.84
HIST1H1DP16402 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIST1H1DP16402 AP003733.4-201ENST00000623785 1697 ntBASIC20.3■□□□□ 0.84
HIST1H1DP16402 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HIST1H1DP16402 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIST1H1DP16402 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIST1H1DP16402 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIST1H1DP16402 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HIST1H1DP16402 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.29■□□□□ 0.84
HIST1H1DP16402 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HIST1H1DP16402 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.29■□□□□ 0.84
HIST1H1DP16402 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HIST1H1DP16402 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HIST1H1DP16402 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HIST1H1DP16402 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
HIST1H1DP16402 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HIST1H1DP16402 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HIST1H1DP16402 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
HIST1H1DP16402 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HIST1H1DP16402 LINC01124-201ENST00000409786 2117 ntBASIC20.28■□□□□ 0.84
HIST1H1DP16402 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.28■□□□□ 0.84
HIST1H1DP16402 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HIST1H1DP16402 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.28■□□□□ 0.84
HIST1H1DP16402 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HIST1H1DP16402 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HIST1H1DP16402 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HIST1H1DP16402 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.27■□□□□ 0.84
HIST1H1DP16402 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
HIST1H1DP16402 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HIST1H1DP16402 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.27■□□□□ 0.84
HIST1H1DP16402 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HIST1H1DP16402 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HIST1H1DP16402 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.83
HIST1H1DP16402 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.27■□□□□ 0.83
HIST1H1DP16402 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HIST1H1DP16402 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HIST1H1DP16402 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
HIST1H1DP16402 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HIST1H1DP16402 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.26■□□□□ 0.83
HIST1H1DP16402 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HIST1H1DP16402 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HIST1H1DP16402 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HIST1H1DP16402 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HIST1H1DP16402 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
HIST1H1DP16402 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
HIST1H1DP16402 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.26■□□□□ 0.83
HIST1H1DP16402 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.26■□□□□ 0.83
HIST1H1DP16402 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HIST1H1DP16402 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HIST1H1DP16402 AC097639.1-201ENST00000565519 1891 ntBASIC20.26■□□□□ 0.83
HIST1H1DP16402 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HIST1H1DP16402 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
HIST1H1DP16402 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HIST1H1DP16402 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HIST1H1DP16402 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HIST1H1DP16402 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HIST1H1DP16402 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.25■□□□□ 0.83
HIST1H1DP16402 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HIST1H1DP16402 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
HIST1H1DP16402 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.24■□□□□ 0.83
HIST1H1DP16402 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HIST1H1DP16402 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.24■□□□□ 0.83
HIST1H1DP16402 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HIST1H1DP16402 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HIST1H1DP16402 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.24■□□□□ 0.83
HIST1H1DP16402 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.24■□□□□ 0.83
HIST1H1DP16402 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.24■□□□□ 0.83
HIST1H1DP16402 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HIST1H1DP16402 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.24■□□□□ 0.83
HIST1H1DP16402 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HIST1H1DP16402 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.24■□□□□ 0.83
HIST1H1DP16402 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HIST1H1DP16402 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HIST1H1DP16402 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HIST1H1DP16402 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HIST1H1DP16402 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
HIST1H1DP16402 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HIST1H1DP16402 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HIST1H1DP16402 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
HIST1H1DP16402 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HIST1H1DP16402 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms