Protein–RNA interactions for Protein: P09486

SPARC, SPARC, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCP09486 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
SPARCP09486 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SPARCP09486 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.28■■□□□ 1
SPARCP09486 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.28■■□□□ 1
SPARCP09486 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.28■■□□□ 1
SPARCP09486 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.28■■□□□ 1
SPARCP09486 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.28■■□□□ 1
SPARCP09486 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.28■■□□□ 1
SPARCP09486 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SPARCP09486 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
SPARCP09486 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.27■■□□□ 1
SPARCP09486 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.27■■□□□ 1
SPARCP09486 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.27■■□□□ 1
SPARCP09486 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.27■■□□□ 1
SPARCP09486 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.27■■□□□ 1
SPARCP09486 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SPARCP09486 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SPARCP09486 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SPARCP09486 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SPARCP09486 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SPARCP09486 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SPARCP09486 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.26■□□□□ 0.99
SPARCP09486 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SPARCP09486 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SPARCP09486 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SPARCP09486 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
SPARCP09486 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.26■□□□□ 0.99
SPARCP09486 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SPARCP09486 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SPARCP09486 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.25■□□□□ 0.99
SPARCP09486 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.25■□□□□ 0.99
SPARCP09486 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.24■□□□□ 0.99
SPARCP09486 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.24■□□□□ 0.99
SPARCP09486 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPARCP09486 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.24■□□□□ 0.99
SPARCP09486 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPARCP09486 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPARCP09486 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SPARCP09486 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.24■□□□□ 0.99
SPARCP09486 AC142381.3-201ENST00000568208 1670 ntBASIC21.24■□□□□ 0.99
SPARCP09486 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SPARCP09486 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SPARCP09486 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SPARCP09486 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SPARCP09486 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SPARCP09486 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.23■□□□□ 0.99
SPARCP09486 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
SPARCP09486 AC022211.4-201ENST00000625094 2161 ntBASIC21.22■□□□□ 0.99
SPARCP09486 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SPARCP09486 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SPARCP09486 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SPARCP09486 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.22■□□□□ 0.99
SPARCP09486 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SPARCP09486 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SPARCP09486 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SPARCP09486 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SPARCP09486 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SPARCP09486 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SPARCP09486 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.22■□□□□ 0.99
SPARCP09486 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SPARCP09486 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SPARCP09486 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SPARCP09486 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SPARCP09486 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SPARCP09486 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SPARCP09486 AL157400.5-201ENST00000507624 621 ntBASIC21.21■□□□□ 0.99
SPARCP09486 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SPARCP09486 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SPARCP09486 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SPARCP09486 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SPARCP09486 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SPARCP09486 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.2■□□□□ 0.98
SPARCP09486 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SPARCP09486 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SPARCP09486 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SPARCP09486 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SPARCP09486 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.19■□□□□ 0.98
SPARCP09486 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.19■□□□□ 0.98
SPARCP09486 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SPARCP09486 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SPARCP09486 AC060814.1-201ENST00000554326 538 ntBASIC21.19■□□□□ 0.98
SPARCP09486 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SPARCP09486 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SPARCP09486 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SPARCP09486 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SPARCP09486 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SPARCP09486 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.18■□□□□ 0.98
SPARCP09486 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SPARCP09486 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.18■□□□□ 0.98
SPARCP09486 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SPARCP09486 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SPARCP09486 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
SPARCP09486 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.17■□□□□ 0.98
SPARCP09486 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.17■□□□□ 0.98
SPARCP09486 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.17■□□□□ 0.98
SPARCP09486 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SPARCP09486 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.16■□□□□ 0.98
SPARCP09486 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SPARCP09486 AC138932.3-201ENST00000567634 1902 ntBASIC21.16■□□□□ 0.98
SPARCP09486 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms