Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
CHRNA1P02708 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.53■■□□□ 1.84
CHRNA1P02708 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
CHRNA1P02708 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
CHRNA1P02708 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.53■■□□□ 1.84
CHRNA1P02708 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC26.53■■□□□ 1.84
CHRNA1P02708 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.53■■□□□ 1.84
CHRNA1P02708 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC26.52■■□□□ 1.84
CHRNA1P02708 AL356441.2-201ENST00000443009 864 ntBASIC26.52■■□□□ 1.84
CHRNA1P02708 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CHRNA1P02708 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.51■■□□□ 1.83
CHRNA1P02708 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CHRNA1P02708 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CHRNA1P02708 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CHRNA1P02708 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
CHRNA1P02708 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
CHRNA1P02708 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CHRNA1P02708 Z92544.1-202ENST00000571933 1220 ntBASIC26.5■■□□□ 1.83
CHRNA1P02708 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.49■■□□□ 1.83
CHRNA1P02708 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC26.49■■□□□ 1.83
CHRNA1P02708 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
CHRNA1P02708 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
CHRNA1P02708 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC26.48■■□□□ 1.83
CHRNA1P02708 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CHRNA1P02708 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CHRNA1P02708 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CHRNA1P02708 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC26.48■■□□□ 1.83
CHRNA1P02708 AC022616.5-201ENST00000518796 181 ntBASIC26.48■■□□□ 1.83
CHRNA1P02708 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC26.48■■□□□ 1.83
CHRNA1P02708 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CHRNA1P02708 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.47■■□□□ 1.83
CHRNA1P02708 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CHRNA1P02708 AP004609.3-201ENST00000610705 1884 ntBASIC26.47■■□□□ 1.83
CHRNA1P02708 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHRNA1P02708 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC26.46■■□□□ 1.83
CHRNA1P02708 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHRNA1P02708 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CHRNA1P02708 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHRNA1P02708 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
CHRNA1P02708 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
CHRNA1P02708 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC26.45■■□□□ 1.82
CHRNA1P02708 MTURN-203ENST00000409688 843 ntTSL 2 BASIC26.45■■□□□ 1.82
CHRNA1P02708 CREM-229ENST00000474362 1030 ntTSL 2 BASIC26.45■■□□□ 1.82
CHRNA1P02708 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CHRNA1P02708 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC26.44■■□□□ 1.82
CHRNA1P02708 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
CHRNA1P02708 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
CHRNA1P02708 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
CHRNA1P02708 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
CHRNA1P02708 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
CHRNA1P02708 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
CHRNA1P02708 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC26.43■■□□□ 1.82
CHRNA1P02708 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CHRNA1P02708 KRT18P24-201ENST00000344739 1156 ntBASIC26.42■■□□□ 1.82
CHRNA1P02708 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
CHRNA1P02708 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.42■■□□□ 1.82
CHRNA1P02708 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC26.42■■□□□ 1.82
CHRNA1P02708 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CHRNA1P02708 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.41■■□□□ 1.82
CHRNA1P02708 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CHRNA1P02708 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.41■■□□□ 1.82
CHRNA1P02708 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
CHRNA1P02708 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC26.41■■□□□ 1.82
CHRNA1P02708 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26.41■■□□□ 1.82
CHRNA1P02708 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CHRNA1P02708 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC26.4■■□□□ 1.82
CHRNA1P02708 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CHRNA1P02708 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CHRNA1P02708 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
CHRNA1P02708 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CHRNA1P02708 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.82
CHRNA1P02708 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
CHRNA1P02708 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC26.39■■□□□ 1.81
CHRNA1P02708 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CHRNA1P02708 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.38■■□□□ 1.81
CHRNA1P02708 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHRNA1P02708 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CHRNA1P02708 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHRNA1P02708 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC26.38■■□□□ 1.81
CHRNA1P02708 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.37■■□□□ 1.81
CHRNA1P02708 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.37■■□□□ 1.81
CHRNA1P02708 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
CHRNA1P02708 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.37■■□□□ 1.81
CHRNA1P02708 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
CHRNA1P02708 MIR4787-201ENST00000607364 84 ntBASIC26.37■■□□□ 1.81
CHRNA1P02708 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CHRNA1P02708 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CHRNA1P02708 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CHRNA1P02708 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
CHRNA1P02708 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CHRNA1P02708 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CHRNA1P02708 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
CHRNA1P02708 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CHRNA1P02708 BX664725.1-201ENST00000438252 379 ntBASIC26.36■■□□□ 1.81
CHRNA1P02708 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC26.36■■□□□ 1.81
CHRNA1P02708 KRT125P-201ENST00000546827 989 ntBASIC26.36■■□□□ 1.81
CHRNA1P02708 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
CHRNA1P02708 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC26.35■■□□□ 1.81
CHRNA1P02708 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.35■■□□□ 1.81
CHRNA1P02708 AC120024.1-201ENST00000562672 995 ntBASIC26.35■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms