Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
CCNKO75909 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.75■□□□□ 0.91
CCNKO75909 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CCNKO75909 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCNKO75909 AL117328.2-201ENST00000624617 1940 ntBASIC20.75■□□□□ 0.91
CCNKO75909 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.75■□□□□ 0.91
CCNKO75909 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCNKO75909 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCNKO75909 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCNKO75909 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.75■□□□□ 0.91
CCNKO75909 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.74■□□□□ 0.91
CCNKO75909 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCNKO75909 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCNKO75909 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.74■□□□□ 0.91
CCNKO75909 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCNKO75909 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCNKO75909 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.73■□□□□ 0.91
CCNKO75909 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCNKO75909 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
CCNKO75909 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CCNKO75909 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CCNKO75909 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCNKO75909 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCNKO75909 LINC00565-201ENST00000562710 2331 ntBASIC20.71■□□□□ 0.91
CCNKO75909 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCNKO75909 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.71■□□□□ 0.91
CCNKO75909 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCNKO75909 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCNKO75909 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCNKO75909 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCNKO75909 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CCNKO75909 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCNKO75909 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCNKO75909 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCNKO75909 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCNKO75909 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCNKO75909 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CCNKO75909 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCNKO75909 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCNKO75909 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCNKO75909 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.69■□□□□ 0.9
CCNKO75909 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCNKO75909 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCNKO75909 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCNKO75909 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCNKO75909 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.69■□□□□ 0.9
CCNKO75909 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.69■□□□□ 0.9
CCNKO75909 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CCNKO75909 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCNKO75909 AC010501.1-201ENST00000606270 1962 ntBASIC20.68■□□□□ 0.9
CCNKO75909 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCNKO75909 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCNKO75909 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCNKO75909 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CCNKO75909 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CCNKO75909 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.68■□□□□ 0.9
CCNKO75909 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCNKO75909 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.68■□□□□ 0.9
CCNKO75909 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCNKO75909 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.68■□□□□ 0.9
CCNKO75909 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCNKO75909 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.68■□□□□ 0.9
CCNKO75909 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCNKO75909 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCNKO75909 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.67■□□□□ 0.9
CCNKO75909 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.67■□□□□ 0.9
CCNKO75909 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCNKO75909 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCNKO75909 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CCNKO75909 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CCNKO75909 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCNKO75909 AC096887.2-201ENST00000623443 1957 ntBASIC20.66■□□□□ 0.9
CCNKO75909 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCNKO75909 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.66■□□□□ 0.9
CCNKO75909 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCNKO75909 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCNKO75909 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.66■□□□□ 0.9
CCNKO75909 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCNKO75909 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCNKO75909 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCNKO75909 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCNKO75909 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCNKO75909 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCNKO75909 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCNKO75909 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC20.65■□□□□ 0.9
CCNKO75909 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCNKO75909 C9orf163-202ENST00000624034 2573 ntBASIC20.65■□□□□ 0.9
CCNKO75909 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCNKO75909 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.64■□□□□ 0.9
CCNKO75909 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CCNKO75909 AC127502.1-201ENST00000399971 1502 ntBASIC20.64■□□□□ 0.9
CCNKO75909 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CCNKO75909 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCNKO75909 AP002365.1-201ENST00000603448 772 ntBASIC20.64■□□□□ 0.89
CCNKO75909 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
CCNKO75909 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCNKO75909 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.64■□□□□ 0.89
CCNKO75909 SLC25A24-204ENST00000569674 2357 ntBASIC20.64■□□□□ 0.89
CCNKO75909 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCNKO75909 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms