Protein–RNA interactions for Protein: O75556

SCGB2A1, Mammaglobin-B, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB2A1O75556 MIR3648-2-201ENST00000581792 180 ntBASIC18.88■□□□□ 0.61
SCGB2A1O75556 MIR3648-1-201ENST00000615959 180 ntBASIC18.88■□□□□ 0.61
SCGB2A1O75556 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCGB2A1O75556 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCGB2A1O75556 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCGB2A1O75556 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCGB2A1O75556 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCGB2A1O75556 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
SCGB2A1O75556 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCGB2A1O75556 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCGB2A1O75556 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC18.86■□□□□ 0.61
SCGB2A1O75556 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC18.86■□□□□ 0.61
SCGB2A1O75556 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCGB2A1O75556 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCGB2A1O75556 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCGB2A1O75556 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCGB2A1O75556 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.86■□□□□ 0.61
SCGB2A1O75556 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.85■□□□□ 0.61
SCGB2A1O75556 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCGB2A1O75556 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCGB2A1O75556 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCGB2A1O75556 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCGB2A1O75556 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SCGB2A1O75556 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCGB2A1O75556 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SCGB2A1O75556 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.84■□□□□ 0.61
SCGB2A1O75556 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.84■□□□□ 0.61
SCGB2A1O75556 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCGB2A1O75556 AL359504.2-201ENST00000605506 1601 ntBASIC18.84■□□□□ 0.61
SCGB2A1O75556 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC18.83■□□□□ 0.6
SCGB2A1O75556 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCGB2A1O75556 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.83■□□□□ 0.6
SCGB2A1O75556 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SCGB2A1O75556 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCGB2A1O75556 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCGB2A1O75556 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SCGB2A1O75556 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCGB2A1O75556 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCGB2A1O75556 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCGB2A1O75556 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCGB2A1O75556 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCGB2A1O75556 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCGB2A1O75556 AC016575.1-201ENST00000607026 382 ntBASIC18.81■□□□□ 0.6
SCGB2A1O75556 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SCGB2A1O75556 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCGB2A1O75556 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCGB2A1O75556 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCGB2A1O75556 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.81■□□□□ 0.6
SCGB2A1O75556 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCGB2A1O75556 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCGB2A1O75556 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCGB2A1O75556 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.81■□□□□ 0.6
SCGB2A1O75556 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCGB2A1O75556 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCGB2A1O75556 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCGB2A1O75556 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCGB2A1O75556 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCGB2A1O75556 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.8■□□□□ 0.6
SCGB2A1O75556 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC18.79■□□□□ 0.6
SCGB2A1O75556 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SCGB2A1O75556 METRNL-202ENST00000570778 967 ntTSL 5 BASIC18.79■□□□□ 0.6
SCGB2A1O75556 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC18.79■□□□□ 0.6
SCGB2A1O75556 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCGB2A1O75556 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SCGB2A1O75556 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18.79■□□□□ 0.6
SCGB2A1O75556 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SCGB2A1O75556 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SCGB2A1O75556 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.78■□□□□ 0.6
SCGB2A1O75556 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCGB2A1O75556 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SCGB2A1O75556 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SCGB2A1O75556 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SCGB2A1O75556 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCGB2A1O75556 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SCGB2A1O75556 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SCGB2A1O75556 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCGB2A1O75556 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCGB2A1O75556 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCGB2A1O75556 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SCGB2A1O75556 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCGB2A1O75556 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCGB2A1O75556 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCGB2A1O75556 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCGB2A1O75556 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCGB2A1O75556 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SCGB2A1O75556 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCGB2A1O75556 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCGB2A1O75556 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
SCGB2A1O75556 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
SCGB2A1O75556 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.75■□□□□ 0.59
SCGB2A1O75556 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SCGB2A1O75556 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SCGB2A1O75556 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SCGB2A1O75556 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCGB2A1O75556 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SCGB2A1O75556 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SCGB2A1O75556 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SCGB2A1O75556 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCGB2A1O75556 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCGB2A1O75556 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 364.6 ms