Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.92■■□□□ 1.42
NDUFS3O75489 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.92■■□□□ 1.42
NDUFS3O75489 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.92■■□□□ 1.42
NDUFS3O75489 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NDUFS3O75489 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.91■■□□□ 1.42
NDUFS3O75489 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NDUFS3O75489 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.91■■□□□ 1.42
NDUFS3O75489 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NDUFS3O75489 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
NDUFS3O75489 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NDUFS3O75489 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
NDUFS3O75489 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.91■■□□□ 1.42
NDUFS3O75489 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
NDUFS3O75489 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NDUFS3O75489 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NDUFS3O75489 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NDUFS3O75489 AC020928.2-201ENST00000588717 2197 ntBASIC23.9■■□□□ 1.42
NDUFS3O75489 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NDUFS3O75489 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NDUFS3O75489 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
NDUFS3O75489 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
NDUFS3O75489 RNF126P1-201ENST00000567452 1320 ntBASIC23.89■■□□□ 1.42
NDUFS3O75489 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
NDUFS3O75489 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
NDUFS3O75489 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.89■■□□□ 1.41
NDUFS3O75489 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.88■■□□□ 1.41
NDUFS3O75489 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
NDUFS3O75489 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
NDUFS3O75489 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.88■■□□□ 1.41
NDUFS3O75489 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.88■■□□□ 1.41
NDUFS3O75489 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NDUFS3O75489 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NDUFS3O75489 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
NDUFS3O75489 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
NDUFS3O75489 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NDUFS3O75489 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.87■■□□□ 1.41
NDUFS3O75489 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NDUFS3O75489 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
NDUFS3O75489 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
NDUFS3O75489 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
NDUFS3O75489 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NDUFS3O75489 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NDUFS3O75489 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NDUFS3O75489 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.86■■□□□ 1.41
NDUFS3O75489 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NDUFS3O75489 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
NDUFS3O75489 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NDUFS3O75489 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
NDUFS3O75489 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.85■■□□□ 1.41
NDUFS3O75489 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.85■■□□□ 1.41
NDUFS3O75489 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
NDUFS3O75489 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
NDUFS3O75489 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
NDUFS3O75489 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.85■■□□□ 1.41
NDUFS3O75489 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NDUFS3O75489 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
NDUFS3O75489 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
NDUFS3O75489 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.84■■□□□ 1.41
NDUFS3O75489 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NDUFS3O75489 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
NDUFS3O75489 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
NDUFS3O75489 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
NDUFS3O75489 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
NDUFS3O75489 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
NDUFS3O75489 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.4
NDUFS3O75489 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
NDUFS3O75489 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NDUFS3O75489 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NDUFS3O75489 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NDUFS3O75489 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
NDUFS3O75489 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.81■■□□□ 1.4
NDUFS3O75489 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NDUFS3O75489 AC026202.3-201ENST00000600805 1127 ntBASIC23.81■■□□□ 1.4
NDUFS3O75489 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
NDUFS3O75489 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NDUFS3O75489 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NDUFS3O75489 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
NDUFS3O75489 RAP2CP1-202ENST00000605179 643 ntBASIC23.8■■□□□ 1.4
NDUFS3O75489 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.8■■□□□ 1.4
NDUFS3O75489 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
NDUFS3O75489 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NDUFS3O75489 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
NDUFS3O75489 HSD17B1P1-201ENST00000590052 955 ntBASIC23.79■■□□□ 1.4
NDUFS3O75489 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.79■■□□□ 1.4
NDUFS3O75489 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.78■■□□□ 1.4
NDUFS3O75489 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NDUFS3O75489 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.78■■□□□ 1.4
NDUFS3O75489 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.78■■□□□ 1.4
NDUFS3O75489 AC097639.1-201ENST00000565519 1891 ntBASIC23.78■■□□□ 1.4
NDUFS3O75489 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
NDUFS3O75489 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
NDUFS3O75489 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NDUFS3O75489 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
NDUFS3O75489 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NDUFS3O75489 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
NDUFS3O75489 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NDUFS3O75489 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
NDUFS3O75489 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.77■■□□□ 1.4
NDUFS3O75489 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.77■■□□□ 1.4
NDUFS3O75489 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms