Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
URB1O60287 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
URB1O60287 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
URB1O60287 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
URB1O60287 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
URB1O60287 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
URB1O60287 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
URB1O60287 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC22.84■■□□□ 1.25
URB1O60287 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
URB1O60287 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
URB1O60287 AL356740.2-201ENST00000601559 647 ntBASIC22.83■■□□□ 1.25
URB1O60287 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.83■■□□□ 1.25
URB1O60287 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
URB1O60287 SUDS3P1-201ENST00000505831 966 ntBASIC22.83■■□□□ 1.24
URB1O60287 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
URB1O60287 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC22.82■■□□□ 1.24
URB1O60287 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.82■■□□□ 1.24
URB1O60287 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC22.82■■□□□ 1.24
URB1O60287 AL117332.1-201ENST00000622628 974 ntBASIC22.82■■□□□ 1.24
URB1O60287 AL139393.2-201ENST00000608721 2025 ntBASIC22.82■■□□□ 1.24
URB1O60287 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
URB1O60287 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.81■■□□□ 1.24
URB1O60287 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.81■■□□□ 1.24
URB1O60287 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
URB1O60287 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.8■■□□□ 1.24
URB1O60287 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.8■■□□□ 1.24
URB1O60287 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.8■■□□□ 1.24
URB1O60287 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC22.8■■□□□ 1.24
URB1O60287 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
URB1O60287 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
URB1O60287 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
URB1O60287 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
URB1O60287 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.79■■□□□ 1.24
URB1O60287 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
URB1O60287 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
URB1O60287 MIR5787-201ENST00000611784 55 ntBASIC22.78■■□□□ 1.24
URB1O60287 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.78■■□□□ 1.24
URB1O60287 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
URB1O60287 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.77■■□□□ 1.24
URB1O60287 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.77■■□□□ 1.24
URB1O60287 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.77■■□□□ 1.24
URB1O60287 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.77■■□□□ 1.24
URB1O60287 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
URB1O60287 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
URB1O60287 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
URB1O60287 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22.77■■□□□ 1.24
URB1O60287 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC22.77■■□□□ 1.23
URB1O60287 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
URB1O60287 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC22.76■■□□□ 1.23
URB1O60287 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
URB1O60287 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
URB1O60287 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
URB1O60287 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.76■■□□□ 1.23
URB1O60287 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
URB1O60287 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
URB1O60287 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
URB1O60287 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
URB1O60287 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
URB1O60287 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC22.75■■□□□ 1.23
URB1O60287 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
URB1O60287 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.75■■□□□ 1.23
URB1O60287 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.75■■□□□ 1.23
URB1O60287 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
URB1O60287 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
URB1O60287 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
URB1O60287 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC22.74■■□□□ 1.23
URB1O60287 WHAMMP3-201ENST00000611636 1609 ntBASIC22.74■■□□□ 1.23
URB1O60287 AC120024.1-201ENST00000562672 995 ntBASIC22.74■■□□□ 1.23
URB1O60287 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.74■■□□□ 1.23
URB1O60287 MIR6724-1-201ENST00000616420 92 ntBASIC22.74■■□□□ 1.23
URB1O60287 MIR6724-2-201ENST00000616483 92 ntBASIC22.74■■□□□ 1.23
URB1O60287 MIR6724-4-201ENST00000617390 92 ntBASIC22.74■■□□□ 1.23
URB1O60287 MIR6724-3-201ENST00000622482 92 ntBASIC22.74■■□□□ 1.23
URB1O60287 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
URB1O60287 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
URB1O60287 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
URB1O60287 AP002414.2-202ENST00000590929 1450 ntBASIC22.74■■□□□ 1.23
URB1O60287 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.73■■□□□ 1.23
URB1O60287 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
URB1O60287 KRT18P10-201ENST00000388836 1287 ntBASIC22.73■■□□□ 1.23
URB1O60287 AC106739.1-201ENST00000617035 715 ntBASIC22.73■■□□□ 1.23
URB1O60287 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
URB1O60287 AC010997.5-201ENST00000609182 354 ntBASIC22.73■■□□□ 1.23
URB1O60287 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.73■■□□□ 1.23
URB1O60287 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22.72■■□□□ 1.23
URB1O60287 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
URB1O60287 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
URB1O60287 AC142381.2-201ENST00000566120 298 ntBASIC22.72■■□□□ 1.23
URB1O60287 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
URB1O60287 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
URB1O60287 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC22.72■■□□□ 1.23
URB1O60287 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
URB1O60287 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.71■■□□□ 1.23
URB1O60287 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.71■■□□□ 1.23
URB1O60287 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
URB1O60287 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.71■■□□□ 1.23
URB1O60287 AL512631.2-201ENST00000604634 923 ntBASIC22.71■■□□□ 1.23
URB1O60287 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
URB1O60287 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC22.71■■□□□ 1.23
URB1O60287 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms