Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTL8CO15255 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC16.14■□□□□ 0.17
RTL8CO15255 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
RTL8CO15255 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTL8CO15255 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC16.14■□□□□ 0.17
RTL8CO15255 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RTL8CO15255 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RTL8CO15255 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC16.13■□□□□ 0.17
RTL8CO15255 AL139246.5-201ENST00000606645 996 ntBASIC16.13■□□□□ 0.17
RTL8CO15255 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
RTL8CO15255 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RTL8CO15255 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC16.13■□□□□ 0.17
RTL8CO15255 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RTL8CO15255 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
RTL8CO15255 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RTL8CO15255 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RTL8CO15255 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC16.12■□□□□ 0.17
RTL8CO15255 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RTL8CO15255 AC137630.3-201ENST00000607245 391 ntBASIC16.12■□□□□ 0.17
RTL8CO15255 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC16.12■□□□□ 0.17
RTL8CO15255 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RTL8CO15255 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RTL8CO15255 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
RTL8CO15255 NALT1-201ENST00000429224 738 ntTSL 5 BASIC16.11■□□□□ 0.17
RTL8CO15255 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RTL8CO15255 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC16.11■□□□□ 0.17
RTL8CO15255 RALB-208ENST00000631312 311 ntTSL 5 BASIC16.11■□□□□ 0.17
RTL8CO15255 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RTL8CO15255 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RTL8CO15255 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTL8CO15255 PROC-203ENST00000409048 1586 ntTSL 5 BASIC16.1■□□□□ 0.17
RTL8CO15255 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTL8CO15255 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTL8CO15255 KRT18P10-201ENST00000388836 1287 ntBASIC16.1■□□□□ 0.17
RTL8CO15255 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
RTL8CO15255 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC16.1■□□□□ 0.17
RTL8CO15255 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC16.1■□□□□ 0.17
RTL8CO15255 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC16.1■□□□□ 0.17
RTL8CO15255 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC16.1■□□□□ 0.17
RTL8CO15255 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.1■□□□□ 0.17
RTL8CO15255 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RTL8CO15255 AC021242.3-201ENST00000607598 1377 ntBASIC16.1■□□□□ 0.17
RTL8CO15255 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTL8CO15255 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RTL8CO15255 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTL8CO15255 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RTL8CO15255 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RTL8CO15255 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RTL8CO15255 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
RTL8CO15255 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC16.09■□□□□ 0.17
RTL8CO15255 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC16.09■□□□□ 0.17
RTL8CO15255 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RTL8CO15255 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC16.09■□□□□ 0.17
RTL8CO15255 AC131281.2-201ENST00000520478 145 ntBASIC16.09■□□□□ 0.17
RTL8CO15255 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RTL8CO15255 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RTL8CO15255 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC16.08■□□□□ 0.17
RTL8CO15255 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
RTL8CO15255 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RTL8CO15255 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RTL8CO15255 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RTL8CO15255 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC16.08■□□□□ 0.16
RTL8CO15255 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC16.08■□□□□ 0.16
RTL8CO15255 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC16.08■□□□□ 0.16
RTL8CO15255 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
RTL8CO15255 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
RTL8CO15255 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RTL8CO15255 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC16.07■□□□□ 0.16
RTL8CO15255 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RTL8CO15255 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC16.07■□□□□ 0.16
RTL8CO15255 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC16.07■□□□□ 0.16
RTL8CO15255 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC16.07■□□□□ 0.16
RTL8CO15255 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC16.07■□□□□ 0.16
RTL8CO15255 AC120024.1-201ENST00000562672 995 ntBASIC16.07■□□□□ 0.16
RTL8CO15255 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC16.07■□□□□ 0.16
RTL8CO15255 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RTL8CO15255 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC16.07■□□□□ 0.16
RTL8CO15255 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RTL8CO15255 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RTL8CO15255 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RTL8CO15255 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.06■□□□□ 0.16
RTL8CO15255 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.06■□□□□ 0.16
RTL8CO15255 AC092028.1-203ENST00000608262 953 ntBASIC16.06■□□□□ 0.16
RTL8CO15255 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RTL8CO15255 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
RTL8CO15255 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RTL8CO15255 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTL8CO15255 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTL8CO15255 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTL8CO15255 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTL8CO15255 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTL8CO15255 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RTL8CO15255 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC16.05■□□□□ 0.16
RTL8CO15255 AC139426.1-201ENST00000568218 2529 ntBASIC16.05■□□□□ 0.16
RTL8CO15255 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC16.04■□□□□ 0.16
RTL8CO15255 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTL8CO15255 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTL8CO15255 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RTL8CO15255 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTL8CO15255 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms