Protein–RNA interactions for Protein: A6NKG5

RTL1, Retrotransposon-like protein 1, humanhuman

Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1A6NKG5 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
RTL1A6NKG5 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
RTL1A6NKG5 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC32.4■■■□□ 2.78
RTL1A6NKG5 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
RTL1A6NKG5 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
RTL1A6NKG5 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC32.39■■■□□ 2.78
RTL1A6NKG5 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
RTL1A6NKG5 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC32.38■■■□□ 2.77
RTL1A6NKG5 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
RTL1A6NKG5 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC32.38■■■□□ 2.77
RTL1A6NKG5 AL356441.2-201ENST00000443009 864 ntBASIC32.38■■■□□ 2.77
RTL1A6NKG5 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC32.38■■■□□ 2.77
RTL1A6NKG5 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC32.37■■■□□ 2.77
RTL1A6NKG5 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
RTL1A6NKG5 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC32.37■■■□□ 2.77
RTL1A6NKG5 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
RTL1A6NKG5 THA1P-201ENST00000590384 1145 ntBASIC32.36■■■□□ 2.77
RTL1A6NKG5 AC131212.1-201ENST00000613771 668 ntBASIC32.35■■■□□ 2.77
RTL1A6NKG5 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC32.35■■■□□ 2.77
RTL1A6NKG5 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC32.35■■■□□ 2.77
RTL1A6NKG5 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
RTL1A6NKG5 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
RTL1A6NKG5 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC32.34■■■□□ 2.77
RTL1A6NKG5 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
RTL1A6NKG5 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC32.34■■■□□ 2.77
RTL1A6NKG5 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC32.34■■■□□ 2.77
RTL1A6NKG5 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC32.34■■■□□ 2.77
RTL1A6NKG5 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC32.34■■■□□ 2.77
RTL1A6NKG5 SHF-206ENST00000560471 2499 ntTSL 5 BASIC32.33■■■□□ 2.77
RTL1A6NKG5 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
RTL1A6NKG5 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
RTL1A6NKG5 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
RTL1A6NKG5 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
RTL1A6NKG5 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC32.32■■■□□ 2.77
RTL1A6NKG5 AL592295.1-201ENST00000400984 884 ntBASIC32.32■■■□□ 2.77
RTL1A6NKG5 AC239859.2-201ENST00000444165 318 ntBASIC32.32■■■□□ 2.77
RTL1A6NKG5 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC32.32■■■□□ 2.77
RTL1A6NKG5 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
RTL1A6NKG5 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
RTL1A6NKG5 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC32.31■■■□□ 2.76
RTL1A6NKG5 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
RTL1A6NKG5 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
RTL1A6NKG5 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
RTL1A6NKG5 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
RTL1A6NKG5 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
RTL1A6NKG5 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC32.3■■■□□ 2.76
RTL1A6NKG5 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC32.3■■■□□ 2.76
RTL1A6NKG5 AP004609.3-201ENST00000610705 1884 ntBASIC32.29■■■□□ 2.76
RTL1A6NKG5 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC32.29■■■□□ 2.76
RTL1A6NKG5 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
RTL1A6NKG5 CREM-229ENST00000474362 1030 ntTSL 2 BASIC32.29■■■□□ 2.76
RTL1A6NKG5 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC32.29■■■□□ 2.76
RTL1A6NKG5 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC32.29■■■□□ 2.76
RTL1A6NKG5 SHF-208ENST00000560734 1731 ntTSL 3 BASIC32.28■■■□□ 2.76
RTL1A6NKG5 KRT18P24-201ENST00000344739 1156 ntBASIC32.28■■■□□ 2.76
RTL1A6NKG5 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC32.28■■■□□ 2.76
RTL1A6NKG5 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC32.27■■■□□ 2.76
RTL1A6NKG5 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC32.27■■■□□ 2.76
RTL1A6NKG5 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC32.27■■■□□ 2.76
RTL1A6NKG5 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC32.27■■■□□ 2.76
RTL1A6NKG5 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC32.27■■■□□ 2.76
RTL1A6NKG5 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
RTL1A6NKG5 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC32.26■■■□□ 2.75
RTL1A6NKG5 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
RTL1A6NKG5 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC32.25■■■□□ 2.75
RTL1A6NKG5 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
RTL1A6NKG5 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC32.25■■■□□ 2.75
RTL1A6NKG5 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC32.24■■■□□ 2.75
RTL1A6NKG5 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC32.24■■■□□ 2.75
RTL1A6NKG5 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC32.24■■■□□ 2.75
RTL1A6NKG5 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC32.24■■■□□ 2.75
RTL1A6NKG5 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC32.24■■■□□ 2.75
RTL1A6NKG5 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
RTL1A6NKG5 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
RTL1A6NKG5 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
RTL1A6NKG5 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
RTL1A6NKG5 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC32.23■■■□□ 2.75
RTL1A6NKG5 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
RTL1A6NKG5 BX664725.1-201ENST00000438252 379 ntBASIC32.23■■■□□ 2.75
RTL1A6NKG5 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC32.23■■■□□ 2.75
RTL1A6NKG5 AC142086.6-201ENST00000621154 1765 ntBASIC32.23■■■□□ 2.75
RTL1A6NKG5 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC32.23■■■□□ 2.75
RTL1A6NKG5 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
RTL1A6NKG5 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC32.23■■■□□ 2.75
RTL1A6NKG5 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC32.22■■■□□ 2.75
RTL1A6NKG5 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
RTL1A6NKG5 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
RTL1A6NKG5 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
RTL1A6NKG5 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
RTL1A6NKG5 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC32.21■■■□□ 2.75
RTL1A6NKG5 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC32.21■■■□□ 2.75
RTL1A6NKG5 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC32.21■■■□□ 2.75
RTL1A6NKG5 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC32.2■■■□□ 2.75
RTL1A6NKG5 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC32.2■■■□□ 2.75
RTL1A6NKG5 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC32.2■■■□□ 2.75
RTL1A6NKG5 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC32.2■■■□□ 2.75
RTL1A6NKG5 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC32.2■■■□□ 2.75
RTL1A6NKG5 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC32.2■■■□□ 2.75
RTL1A6NKG5 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC32.2■■■□□ 2.75
RTL1A6NKG5 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC32.2■■■□□ 2.74
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms